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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G78150:CDS:1 | 123 | Chr1: 29404996-29405118 | Arabidopsis thaliana |
AT1G78150:CDS:2 | 74 | Chr1: 29405214-29405287 | Arabidopsis thaliana |
AT1G78150:CDS:4 | 100 | Chr1: 29405553-29405652 | Arabidopsis thaliana |
AT1G78150:CDS:5 | 279 | Chr1: 29405731-29406009 | Arabidopsis thaliana |
AT1G78150:CDS:6 | 249 | Chr1: 29406093-29406341 | Arabidopsis thaliana |
AT1G78150:CDS:1.1 | 123 | Chr1: 29404996-29405118 | Arabidopsis thaliana |
AT1G78150:CDS:2.1 | 74 | Chr1: 29405214-29405287 | Arabidopsis thaliana |
AT1G78150:CDS:4.1 | 100 | Chr1: 29405553-29405652 | Arabidopsis thaliana |
AT1G78150:CDS:5.1 | 279 | Chr1: 29405731-29406009 | Arabidopsis thaliana |
AT1G78150:CDS:6.1 | 249 | Chr1: 29406093-29406341 | Arabidopsis thaliana |
AT1G78150:CDS:1.2 | 123 | Chr1: 29404996-29405118 | Arabidopsis thaliana |
AT1G78150:CDS:2.2 | 74 | Chr1: 29405214-29405287 | Arabidopsis thaliana |
AT1G78150:CDS:3 | 187 | Chr1: 29405466-29405652 | Arabidopsis thaliana |
AT1G78150:CDS:5.2 | 279 | Chr1: 29405731-29406009 | Arabidopsis thaliana |
AT1G78150:CDS:6.2 | 249 | Chr1: 29406093-29406341 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G78150:exon:1 | 193 | Chr1: 29404648-29404840 | Arabidopsis thaliana |
AT1G78150:exon:4 | 143 | Chr1: 29404976-29405118 | Arabidopsis thaliana |
AT1G78150:exon:11 | 660 | Chr1: 29406093-29406752 | Arabidopsis thaliana |
AT1G78150:exon:2 | 348 | Chr1: 29404771-29405118 | Arabidopsis thaliana |
AT1G78150:exon:7 | 100 | Chr1: 29405553-29405652 | Arabidopsis thaliana |
AT1G78150:exon:10 | 649 | Chr1: 29406093-29406741 | Arabidopsis thaliana |
AT1G78150:exon:3 | 239 | Chr1: 29404880-29405118 | Arabidopsis thaliana |
AT1G78150:exon:5 | 74 | Chr1: 29405214-29405287 | Arabidopsis thaliana |
AT1G78150:exon:6 | 187 | Chr1: 29405466-29405652 | Arabidopsis thaliana |
AT1G78150:exon:8 | 279 | Chr1: 29405731-29406009 | Arabidopsis thaliana |
AT1G78150:exon:9 | 282 | Chr1: 29406093-29406374 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G78150:five_prime_UTR:1 | 193 | Chr1: 29404648-29404840 | Arabidopsis thaliana |
AT1G78150:five_prime_UTR:4 | 20 | Chr1: 29404976-29404995 | Arabidopsis thaliana |
AT1G78150:five_prime_UTR:2 | 225 | Chr1: 29404771-29404995 | Arabidopsis thaliana |
AT1G78150:five_prime_UTR:3 | 116 | Chr1: 29404880-29404995 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G78150.2 | 1449 | Chr1: 29404648-29406752 |
AT1G78150.1 | 1450 | Chr1: 29404771-29406741 |
AT1G78150.3 | 1061 | Chr1: 29404880-29406374 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G78150:three_prime_UTR:3 | 411 | Chr1: 29406342-29406752 | Arabidopsis thaliana |
AT1G78150:three_prime_UTR:2 | 400 | Chr1: 29406342-29406741 | Arabidopsis thaliana |
AT1G78150:three_prime_UTR:1 | 33 | Chr1: 29406342-29406374 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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