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Gene : PIN6 A. thaliana

DB identifier  ? AT1G77110 Secondary Identifier  ? locus:2025312
Name  ? PIN-FORMED 6 Brief Description  Auxin efflux carrier family protein
TAIR Computational Description  Auxin efflux carrier family protein;(source:Araport11)
TAIR Curator Summary  Rate-limiting factor in saturable efflux of auxins. PINs are directly involved of in catalyzing cellular auxin efflux.
TAIR Short Description  Auxin efflux carrier family protein
TAIR Aliases  PIN6

6 Gene Rifs

1 Organism

24 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4092  
Location: Chr1:28970714-28974805

Gene models - PIN6 AT1G77110

? Gene models

Transcripts: 2  Exons: 13  Introns: 11 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PIN6_ARATH developmental stage Expressed during vein formation (PubMed:23437008). Decreased expression during seedling development (PubMed:23922907).
PIN6_ARATH function Component of the intracellular auxin-transport pathway (PubMed:19506555). Regulates auxin transport and auxin homeostasis (PubMed:23922907). Directly involved in the regulation of nectar production (PubMed:23551385). Involved in unfolded protein response (UPR) activation (PubMed:24180465). Involved in the control of vein patterning (PubMed:23437008, PubMed:24304505). Redundantly with PIN8, inhibits the vein-formation-promoting functions of PIN5 (PubMed:26560462). PIN5, PIN6, and PIN8 control vein network geometry, but they are expressed in mutually exclusive domains of leaf vascular cells (PubMed:26560462).
A0A1P8AVV0_ARATH function May act as a component of the auxin efflux carrier.
A0A1P8AVV0_ARATH PIN6_ARATH similarity Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
PIN6_ARATH tissue specificity Expressed in the vasculature of the primary root, cotyledons, floral stem, sepals and the main transmitting tract of the reproductive silique (PubMed:23922907, PubMed:24487186). Expressed in embryos, shoot meristem, root tip and lateral root meristems (PubMed:23922907). Expressed in the nectaries and the floral organ boundaries of the anthers (PubMed:23551385, PubMed:23922907). Detected in pollen (PubMed:22540348). Expressed in broad subepidermal domains that narrowed to sites of vein formation (PubMed:23437008). Expressed in veins of mature leaves (PubMed:24487186, PubMed:26560462).

2 Proteins

Function

Interactions

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets