help  | faq  | software  | BAR
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : AT1G77090 A. thaliana

DB identifier  ? AT1G77090 Secondary Identifier  ? locus:2025292
Brief Description  thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)
TAIR Computational Description  thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11)
TAIR Curator Summary  PSII PsbP family protein, located in chloroplast, involved in change in response to H2O2.
TAIR Short Description  Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

0 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1663  
Location: Chr1:28960312-28961974 reverse strand

Gene models - AT1G77090 AT1G77090

? Gene models

Transcripts: 1  Exons: 5  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PPD4_ARATH similarity Belongs to the PsbP family.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast thylakoid lumen  ? ECO  
chloroplast thylakoid  ? ECO  
cytosol  ? ECO  
chloroplast stroma  ? ECO  
thylakoid  ? ECO  
photosystem II oxygen evolving complex  ? ECO  
thylakoid lumen  ? ECO  
extrinsic component of membrane  ? ECO  
chloroplast  ? ECO  
mitochondrion  ? ECO  
molecular function
calcium ion binding  ? ECO  
biological process
photosynthesis  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets