External Links
- Aracyc
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- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 14, Exons: 13, Five Prime UTRs: 7, Genes: 2, mRNAs: 6, Three Prime UTRs: 3
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G75170:CDS:1 | 69 | Chr1: 28214405-28214473 | Arabidopsis thaliana |
AT1G75170:CDS:2 | 177 | Chr1: 28214571-28214747 | Arabidopsis thaliana |
AT1G75170:CDS:4 | 99 | Chr1: 28214830-28214928 | Arabidopsis thaliana |
AT1G75170:CDS:6 | 246 | Chr1: 28215013-28215258 | Arabidopsis thaliana |
AT1G75170:CDS:7 | 300 | Chr1: 28215387-28215686 | Arabidopsis thaliana |
AT1G75170:CDS:1.1 | 69 | Chr1: 28214405-28214473 | Arabidopsis thaliana |
AT1G75170:CDS:2.1 | 177 | Chr1: 28214571-28214747 | Arabidopsis thaliana |
AT1G75170:CDS:4.1 | 99 | Chr1: 28214830-28214928 | Arabidopsis thaliana |
AT1G75170:CDS:6.1 | 246 | Chr1: 28215013-28215258 | Arabidopsis thaliana |
AT1G75170:CDS:7.1 | 300 | Chr1: 28215387-28215686 | Arabidopsis thaliana |
AT1G75170:CDS:3 | 4 | Chr1: 28214744-28214747 | Arabidopsis thaliana |
AT1G75170:CDS:5 | 92 | Chr1: 28214837-28214928 | Arabidopsis thaliana |
AT1G75170:CDS:6.2 | 246 | Chr1: 28215013-28215258 | Arabidopsis thaliana |
AT1G75170:CDS:7.2 | 300 | Chr1: 28215387-28215686 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G75170:exon:1 | 284 | Chr1: 28213666-28213949 | Arabidopsis thaliana |
AT1G75170:exon:2 | 23 | Chr1: 28213799-28213821 | Arabidopsis thaliana |
AT1G75170:exon:4 | 30 | Chr1: 28213920-28213949 | Arabidopsis thaliana |
AT1G75170:exon:7 | 99 | Chr1: 28214830-28214928 | Arabidopsis thaliana |
AT1G75170:exon:3 | 143 | Chr1: 28213807-28213949 | Arabidopsis thaliana |
AT1G75170:exon:5 | 128 | Chr1: 28214346-28214473 | Arabidopsis thaliana |
AT1G75170:exon:6 | 177 | Chr1: 28214571-28214747 | Arabidopsis thaliana |
AT1G75170:exon:8 | 92 | Chr1: 28214837-28214928 | Arabidopsis thaliana |
AT1G75170:exon:9 | 246 | Chr1: 28215013-28215258 | Arabidopsis thaliana |
AT1G75170:exon:10 | 501 | Chr1: 28215387-28215887 | Arabidopsis thaliana |
AT1G09537:exon:1 | 443 | Chr1: 28213926-28214368 | Arabidopsis thaliana |
AT1G75180:exon:7 | 545 | Chr1: 28215836-28216380 | Arabidopsis thaliana |
AT1G75180:exon:6 | 540 | Chr1: 28215841-28216380 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G75170:five_prime_UTR:1 | 284 | Chr1: 28213666-28213949 | Arabidopsis thaliana |
AT1G75170:five_prime_UTR:2 | 23 | Chr1: 28213799-28213821 | Arabidopsis thaliana |
AT1G75170:five_prime_UTR:4 | 30 | Chr1: 28213920-28213949 | Arabidopsis thaliana |
AT1G75170:five_prime_UTR:5 | 59 | Chr1: 28214346-28214404 | Arabidopsis thaliana |
AT1G75170:five_prime_UTR:3 | 143 | Chr1: 28213807-28213949 | Arabidopsis thaliana |
AT1G75170:five_prime_UTR:6 | 128 | Chr1: 28214346-28214473 | Arabidopsis thaliana |
AT1G75170:five_prime_UTR:7 | 173 | Chr1: 28214571-28214743 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G09537 | AT1G09537 | 443 | Chr1: 28213926-28214368 | A. thaliana | Natural antisense transcript overlaps with AT1G75170;(source:Araport11) | NULL | ||||
AT1G75180 | locus:2025187 | AT1G75180 | 2966 | Chr1: 28215836-28218801 | A. thaliana | Erythronate-4-phosphate dehydrogenase family protein;(source:Araport11) | NULL | Erythronate-4-phosphate dehydrogenase family protein | LDDH1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G75170.1 | 1435 | Chr1: 28213666-28215887 |
AT1G75170.2 | 1204 | Chr1: 28213799-28215887 |
AT1G75170.3 | 1287 | Chr1: 28213807-28215887 |
AT1G75180.1 | 1543 | Chr1: 28215836-28218330 |
AT1G75180.3 | 1787 | Chr1: 28215836-28218801 |
AT1G75180.2 | 1828 | Chr1: 28215841-28218801 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G75170:three_prime_UTR:1 | 201 | Chr1: 28215687-28215887 | Arabidopsis thaliana |
AT1G75180:three_prime_UTR:3 | 314 | Chr1: 28215836-28216149 | Arabidopsis thaliana |
AT1G75180:three_prime_UTR:2 | 540 | Chr1: 28215841-28216380 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...