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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G74390:CDS:7 | 241 | Chr1: 27961760-27962000 | Arabidopsis thaliana |
AT1G74390:CDS:6 | 722 | Chr1: 27962094-27962815 | Arabidopsis thaliana |
AT1G74390:CDS:5 | 64 | Chr1: 27963012-27963075 | Arabidopsis thaliana |
AT1G74390:CDS:4 | 47 | Chr1: 27963159-27963205 | Arabidopsis thaliana |
AT1G74390:CDS:7.1 | 241 | Chr1: 27961760-27962000 | Arabidopsis thaliana |
AT1G74390:CDS:6.1 | 722 | Chr1: 27962094-27962815 | Arabidopsis thaliana |
AT1G74390:CDS:5.1 | 64 | Chr1: 27963012-27963075 | Arabidopsis thaliana |
AT1G74390:CDS:4.1 | 47 | Chr1: 27963159-27963205 | Arabidopsis thaliana |
AT1G74390:CDS:2 | 158 | Chr1: 27963309-27963466 | Arabidopsis thaliana |
AT1G74390:CDS:1 | 289 | Chr1: 27963538-27963826 | Arabidopsis thaliana |
AT1G74390:CDS:7.2 | 241 | Chr1: 27961760-27962000 | Arabidopsis thaliana |
AT1G74390:CDS:6.2 | 722 | Chr1: 27962094-27962815 | Arabidopsis thaliana |
AT1G74390:CDS:5.2 | 64 | Chr1: 27963012-27963075 | Arabidopsis thaliana |
AT1G74390:CDS:4.2 | 47 | Chr1: 27963159-27963205 | Arabidopsis thaliana |
AT1G74390:CDS:3 | 6 | Chr1: 27963309-27963314 | Arabidopsis thaliana |
AT1G74390:CDS:7.3 | 241 | Chr1: 27961760-27962000 | Arabidopsis thaliana |
AT1G74390:CDS:6.3 | 722 | Chr1: 27962094-27962815 | Arabidopsis thaliana |
AT1G74390:CDS:5.3 | 64 | Chr1: 27963012-27963075 | Arabidopsis thaliana |
AT1G74390:CDS:4.3 | 47 | Chr1: 27963159-27963205 | Arabidopsis thaliana |
AT1G74390:CDS:2.1 | 158 | Chr1: 27963309-27963466 | Arabidopsis thaliana |
AT1G74390:CDS:1.1 | 289 | Chr1: 27963538-27963826 | Arabidopsis thaliana |
AT1G74400:CDS:1 | 1389 | Chr1: 27963953-27965341 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G74390:exon:5 | 111 | Chr1: 27963159-27963269 | Arabidopsis thaliana |
AT1G74390:exon:11 | 36 | Chr1: 27961537-27961572 | Arabidopsis thaliana |
AT1G74390:exon:9 | 286 | Chr1: 27961715-27962000 | Arabidopsis thaliana |
AT1G74390:exon:2 | 342 | Chr1: 27963538-27963879 | Arabidopsis thaliana |
AT1G74390:exon:3 | 646 | Chr1: 27963309-27963954 | Arabidopsis thaliana |
AT1G74390:exon:10 | 464 | Chr1: 27961537-27962000 | Arabidopsis thaliana |
AT1G74390:exon:8 | 722 | Chr1: 27962094-27962815 | Arabidopsis thaliana |
AT1G74390:exon:7 | 64 | Chr1: 27963012-27963075 | Arabidopsis thaliana |
AT1G74390:exon:6 | 47 | Chr1: 27963159-27963205 | Arabidopsis thaliana |
AT1G74390:exon:4 | 158 | Chr1: 27963309-27963466 | Arabidopsis thaliana |
AT1G74390:exon:1 | 417 | Chr1: 27963538-27963954 | Arabidopsis thaliana |
AT1G74400:exon:1 | 1465 | Chr1: 27963926-27965390 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G74390:five_prime_UTR:4 | 64 | Chr1: 27963206-27963269 | Arabidopsis thaliana |
AT1G74390:five_prime_UTR:2 | 53 | Chr1: 27963827-27963879 | Arabidopsis thaliana |
AT1G74390:five_prime_UTR:3 | 640 | Chr1: 27963315-27963954 | Arabidopsis thaliana |
AT1G74390:five_prime_UTR:1 | 128 | Chr1: 27963827-27963954 | Arabidopsis thaliana |
AT1G74400:five_prime_UTR:1 | 27 | Chr1: 27963926-27963952 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G74400 | locus:2019105 | AT1G74400 | 1465 | Chr1: 27963926-27965390 | A. thaliana | Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) | NULL | Tetratricopeptide repeat (TPR)-like superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G74390.4 | 1361 | Chr1: 27961537-27963269 |
AT1G74390.2 | 1655 | Chr1: 27961537-27963879 |
AT1G74390.3 | 1943 | Chr1: 27961537-27963954 |
AT1G74390.1 | 1872 | Chr1: 27961537-27963954 |
AT1G74400.1 | 1465 | Chr1: 27963926-27965390 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G74390:three_prime_UTR:3 | 36 | Chr1: 27961537-27961572 | Arabidopsis thaliana |
AT1G74390:three_prime_UTR:1 | 45 | Chr1: 27961715-27961759 | Arabidopsis thaliana |
AT1G74390:three_prime_UTR:2 | 223 | Chr1: 27961537-27961759 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
NEN3_ARATH | function | Probable exonuclease that may be involved in enuclation of sieve elements. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
nucleic acid binding | ECO |
exonuclease activity | ECO |
metal ion binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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