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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73970:CDS:1 | 1657 | Chr1: 27817140-27818796 | Arabidopsis thaliana |
AT1G73970:CDS:3 | 148 | Chr1: 27818910-27819057 | Arabidopsis thaliana |
AT1G73970:CDS:5 | 148 | Chr1: 27819154-27819301 | Arabidopsis thaliana |
AT1G73970:CDS:6 | 219 | Chr1: 27819395-27819613 | Arabidopsis thaliana |
AT1G73970:CDS:8 | 240 | Chr1: 27819724-27819963 | Arabidopsis thaliana |
AT1G73970:CDS:1.1 | 1657 | Chr1: 27817140-27818796 | Arabidopsis thaliana |
AT1G73970:CDS:3.1 | 148 | Chr1: 27818910-27819057 | Arabidopsis thaliana |
AT1G73970:CDS:5.1 | 148 | Chr1: 27819154-27819301 | Arabidopsis thaliana |
AT1G73970:CDS:7 | 348 | Chr1: 27819395-27819742 | Arabidopsis thaliana |
AT1G73970:CDS:1.2 | 1657 | Chr1: 27817140-27818796 | Arabidopsis thaliana |
AT1G73970:CDS:4 | 158 | Chr1: 27818910-27819067 | Arabidopsis thaliana |
AT1G73970:CDS:2 | 958 | Chr1: 27817839-27818796 | Arabidopsis thaliana |
AT1G73970:CDS:3.2 | 148 | Chr1: 27818910-27819057 | Arabidopsis thaliana |
AT1G73970:CDS:5.2 | 148 | Chr1: 27819154-27819301 | Arabidopsis thaliana |
AT1G73970:CDS:6.1 | 219 | Chr1: 27819395-27819613 | Arabidopsis thaliana |
AT1G73970:CDS:8.1 | 240 | Chr1: 27819724-27819963 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73970:exon:1 | 2019 | Chr1: 27816778-27818796 | Arabidopsis thaliana |
AT1G73970:exon:11 | 447 | Chr1: 27819724-27820170 | Arabidopsis thaliana |
AT1G73970:exon:9 | 684 | Chr1: 27819395-27820078 | Arabidopsis thaliana |
AT1G73970:exon:2 | 2017 | Chr1: 27816780-27818796 | Arabidopsis thaliana |
AT1G73970:exon:6 | 392 | Chr1: 27818910-27819301 | Arabidopsis thaliana |
AT1G73970:exon:3 | 793 | Chr1: 27816798-27817590 | Arabidopsis thaliana |
AT1G73970:exon:4 | 1139 | Chr1: 27817658-27818796 | Arabidopsis thaliana |
AT1G73970:exon:5 | 148 | Chr1: 27818910-27819057 | Arabidopsis thaliana |
AT1G73970:exon:7 | 148 | Chr1: 27819154-27819301 | Arabidopsis thaliana |
AT1G73970:exon:8 | 219 | Chr1: 27819395-27819613 | Arabidopsis thaliana |
AT1G73970:exon:10 | 355 | Chr1: 27819724-27820078 | Arabidopsis thaliana |
AT1G73980:exon:14 | 451 | Chr1: 27820060-27820510 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73970:five_prime_UTR:1 | 362 | Chr1: 27816778-27817139 | Arabidopsis thaliana |
AT1G73970:five_prime_UTR:2 | 360 | Chr1: 27816780-27817139 | Arabidopsis thaliana |
AT1G73970:five_prime_UTR:3 | 793 | Chr1: 27816798-27817590 | Arabidopsis thaliana |
AT1G73970:five_prime_UTR:4 | 181 | Chr1: 27817658-27817838 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G73980 | locus:2031541 | AT1G73980 | 4068 | Chr1: 27820060-27824127 | A. thaliana | Phosphoribulokinase / Uridine kinase family;(source:Araport11) | TTM1 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity. It contains both a uridine kinase (UK) domain,CYTH domain, a coiled-coil domain and a transmembrane domain at the C-terminal Mutants show a delay in leaf senescence. Can functionally complement TTM1 and vise versa. (PMID:28733390) | Phosphoribulokinase / Uridine kinase family | AtTTM1, TTM1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G73970.1 | 2981 | Chr1: 27816778-27820170 |
AT1G73970.2 | 2997 | Chr1: 27816780-27820078 |
AT1G73970.3 | 2983 | Chr1: 27816780-27820078 |
AT1G73970.4 | 2802 | Chr1: 27816798-27820078 |
AT1G73980.3 | 2447 | Chr1: 27820060-27823902 |
AT1G73980.2 | 2564 | Chr1: 27820060-27824127 |
AT1G73980.1 | 2391 | Chr1: 27820060-27824127 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73970:three_prime_UTR:6 | 207 | Chr1: 27819964-27820170 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:4 | 336 | Chr1: 27819743-27820078 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:1 | 234 | Chr1: 27819068-27819301 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:2 | 219 | Chr1: 27819395-27819613 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:3 | 355 | Chr1: 27819724-27820078 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:5 | 115 | Chr1: 27819964-27820078 | Arabidopsis thaliana |
AT1G73980:three_prime_UTR:1 | 232 | Chr1: 27820060-27820291 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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