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Gene : MYB54 A. thaliana

DB identifier  ? AT1G73410 Secondary Identifier  ? locus:2206910
Name  ? myb domain protein 54 Brief Description  myb domain protein 54
TAIR Computational Description  myb domain protein 54;(source:Araport11)
TAIR Curator Summary  Encodes a putative transcription factor that is a member of the R2R3-MYB family.
TAIR Short Description  myb domain protein 54
TAIR Aliases  ATMYB54, MYB54

0 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1725  
Location: Chr1:27601593-27603317

Gene models - MYB54 AT1G73410

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
MYB54_ARATH function Transcription factor that regulates secondary cell wall (SCW) biosynthesis, especially in interfascicular and xylary fibers.
MYB54_ARATH tissue specificity In elongating stem internodes, expressed in developing protoxylem and elongating interfascicular fiber cells. In non-elongating internodes, expressed in developing metaxylem cells and interfascicular fibers. In roots, expressed in developing secondary xylem.

2 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
transcription cis-regulatory region binding  ? ECO  
biological process
regulation of secondary cell wall biogenesis  ? ECO  
cell wall organization  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets