External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 23, Exons: 13, Five Prime UTRs: 6, Gene: 1, mRNAs: 6, Three Prime UTRs: 3, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73130:CDS:1 | 93 | Chr1: 27499467-27499559 | Arabidopsis thaliana |
AT1G73130:CDS:2 | 956 | Chr1: 27499652-27500607 | Arabidopsis thaliana |
AT1G73130:CDS:4 | 332 | Chr1: 27500755-27501086 | Arabidopsis thaliana |
AT1G73130:CDS:5 | 221 | Chr1: 27501245-27501465 | Arabidopsis thaliana |
AT1G73130:CDS:6 | 192 | Chr1: 27501705-27501896 | Arabidopsis thaliana |
AT1G73130:CDS:1.1 | 93 | Chr1: 27499467-27499559 | Arabidopsis thaliana |
AT1G73130:CDS:3 | 1435 | Chr1: 27499652-27501086 | Arabidopsis thaliana |
AT1G73130:CDS:5.1 | 221 | Chr1: 27501245-27501465 | Arabidopsis thaliana |
AT1G73130:CDS:6.1 | 192 | Chr1: 27501705-27501896 | Arabidopsis thaliana |
AT1G73130:CDS:1.2 | 93 | Chr1: 27499467-27499559 | Arabidopsis thaliana |
AT1G73130:CDS:3.1 | 1435 | Chr1: 27499652-27501086 | Arabidopsis thaliana |
AT1G73130:CDS:5.2 | 221 | Chr1: 27501245-27501465 | Arabidopsis thaliana |
AT1G73130:CDS:6.2 | 192 | Chr1: 27501705-27501896 | Arabidopsis thaliana |
AT1G73130:CDS:1.3 | 93 | Chr1: 27499467-27499559 | Arabidopsis thaliana |
AT1G73130:CDS:3.2 | 1435 | Chr1: 27499652-27501086 | Arabidopsis thaliana |
AT1G73130:CDS:5.3 | 221 | Chr1: 27501245-27501465 | Arabidopsis thaliana |
AT1G73130:CDS:6.3 | 192 | Chr1: 27501705-27501896 | Arabidopsis thaliana |
AT1G73130:CDS:1.4 | 93 | Chr1: 27499467-27499559 | Arabidopsis thaliana |
AT1G73130:CDS:2.1 | 956 | Chr1: 27499652-27500607 | Arabidopsis thaliana |
AT1G73130:CDS:4.1 | 332 | Chr1: 27500755-27501086 | Arabidopsis thaliana |
AT1G73130:CDS:5.4 | 221 | Chr1: 27501245-27501465 | Arabidopsis thaliana |
AT1G73130:CDS:6.4 | 192 | Chr1: 27501705-27501896 | Arabidopsis thaliana |
AT1G73140:CDS:5 | 358 | Chr1: 27502133-27502490 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73130:exon:1 | 79 | Chr1: 27498929-27499007 | Arabidopsis thaliana |
AT1G73130:exon:2 | 53 | Chr1: 27498955-27499007 | Arabidopsis thaliana |
AT1G73130:exon:4 | 525 | Chr1: 27499035-27499559 | Arabidopsis thaliana |
AT1G73130:exon:3 | 157 | Chr1: 27499035-27499191 | Arabidopsis thaliana |
AT1G73130:exon:6 | 104 | Chr1: 27499456-27499559 | Arabidopsis thaliana |
AT1G73130:exon:8 | 1435 | Chr1: 27499652-27501086 | Arabidopsis thaliana |
AT1G73130:exon:12 | 569 | Chr1: 27501705-27502273 | Arabidopsis thaliana |
AT1G73130:exon:5 | 163 | Chr1: 27499397-27499559 | Arabidopsis thaliana |
AT1G73130:exon:7 | 956 | Chr1: 27499652-27500607 | Arabidopsis thaliana |
AT1G73130:exon:9 | 332 | Chr1: 27500755-27501086 | Arabidopsis thaliana |
AT1G73130:exon:10 | 221 | Chr1: 27501245-27501465 | Arabidopsis thaliana |
AT1G73130:exon:11 | 351 | Chr1: 27501705-27502055 | Arabidopsis thaliana |
AT1G73140:exon:5 | 470 | Chr1: 27502021-27502490 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73130:five_prime_UTR:1 | 79 | Chr1: 27498929-27499007 | Arabidopsis thaliana |
AT1G73130:five_prime_UTR:2 | 53 | Chr1: 27498955-27499007 | Arabidopsis thaliana |
AT1G73130:five_prime_UTR:4 | 432 | Chr1: 27499035-27499466 | Arabidopsis thaliana |
AT1G73130:five_prime_UTR:3 | 157 | Chr1: 27499035-27499191 | Arabidopsis thaliana |
AT1G73130:five_prime_UTR:6 | 11 | Chr1: 27499456-27499466 | Arabidopsis thaliana |
AT1G73130:five_prime_UTR:5 | 70 | Chr1: 27499397-27499466 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G73140 | locus:2032677 | TBL31 | 1814 | Chr1: 27502021-27503834 | A. thaliana | trichome birefringence-like protein (DUF828);(source:Araport11) | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).The dwarf phenotype can only be seen in tbl3 tbl31 esk1 triple mutant. tbl3 and tbl31 are specifically involved in 3-O-monoacetylation of xylan. | Plant protein of unknown function (DUF828) | TBL31 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G73130.2 | 2043 | Chr1: 27498929-27502055 |
AT1G73130.3 | 2382 | Chr1: 27498955-27502273 |
AT1G73130.1 | 2750 | Chr1: 27499035-27502273 |
AT1G73130.4 | 2486 | Chr1: 27499035-27502273 |
AT1G73130.5 | 2023 | Chr1: 27499397-27502055 |
AT1G73140.1 | 1445 | Chr1: 27502021-27503834 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73130:three_prime_UTR:2 | 377 | Chr1: 27501897-27502273 | Arabidopsis thaliana |
AT1G73130:three_prime_UTR:1 | 159 | Chr1: 27501897-27502055 | Arabidopsis thaliana |
AT1G73140:three_prime_UTR:1 | 112 | Chr1: 27502021-27502132 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE89980 | 140 | Chr1: 27498796-27498935 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE89980:transposon_fragment:1 | 140 | Chr1: 27498796-27498935 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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