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Gene : EDA25 A. thaliana

DB identifier  ? AT1G72440 Secondary Identifier  ? locus:2193972
Name  ? embryo sac development arrest 25 Brief Description  CCAAT-binding factor
TAIR Computational Description  CCAAT-binding factor;(source:Araport11)
TAIR Curator Summary  Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.
TAIR Short Description  CCAAT-binding factor
TAIR Aliases  EDA25, SWA2

1 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5844  
Location: Chr1:27268092-27273935 reverse strand

Gene models - EDA25 AT1G72440

? Gene models

Transcripts: 1  Exons: 16  Introns: 15 

Overlapping Features

? Genome features that overlap coordinates of this Gene

17 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SWA2_ARATH developmental stage During female gametophyte development, detected in the gametophytic nucleus from one-nucleate to two-nucleate stages, and fades out progressively during ovule maturation to be confined to the central cell of mature embryo sac.
SWA2_ARATH function Together with NOC2, probably involved in pre-ribosome export from the nucleus to the cytoplasm (PubMed:19734265). Required for coordinated cell cycle progression during female gametophyte and pollen development (PubMed:19734265, PubMed:15634699).
SWA2_ARATH similarity Belongs to the CBF/MAK21 family.
SWA2_ARATH tissue specificity Mainly expressed in actively dividing tissues (e.g. root tips, lateral root primordia, shoot apices, young leaves, inflorescences and pollen grains) through the plant, including roots, stems, leaves, inflorescences, siliques and seedlings, and in gametophytes.

1 Proteins

Function

Gene Ontology

cellular component
nucleolus  ? ECO  
nucleus  ? ECO  
molecular function
No terms in this category.
biological process
polar nucleus fusion  ? ECO  
embryo sac development  ? ECO  
pollen development  ? ECO  
regulation of cell division  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets