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Gene : CSTF64 A. thaliana

DB identifier  ? AT1G71800 Secondary Identifier  ? locus:2013016
Name  ? cleavage stimulating factor 64 Brief Description  cleavage stimulating factor 64
TAIR Computational Description  cleavage stimulating factor 64;(source:Araport11)
TAIR Curator Summary  RNA 3′-end?processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. Member of CstF complex.
TAIR Short Description  cleavage stimulating factor 64
TAIR Aliases  CSTF64

1 Gene Rifs

1 Organism

11 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3085  
Location: Chr1:26999374-27002458

Gene models - CSTF64 AT1G71800

? Gene models

Transcripts: 1  Exons: 11  Introns: 10 

Overlapping Features Displayer

12 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CTF64_ARATH function One of the multiple factors required for polyadenylation and 3'-end cleavage of pre-mRNAs (By similarity). This subunit is directly involved in the binding to pre-mRNAs, especially on the 3' non-coding region (PubMed:12379796). Required for the targeted 3' processing of antisense transcripts that triggers transcriptional silencing of the corresponding sense gene (PubMed:17008405, PubMed:19965720).

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
mRNA binding  ? ECO  
biological process
RNA 3'-end processing  ? ECO  
developmental growth  ? ECO  
negative regulation of DNA-templated transcription  ? ECO  
mRNA 3'-end processing  ? ECO  
post-transcriptional gene silencing  ? ECO  
regulatory ncRNA-mediated gene silencing  ? ECO  
antisense RNA metabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets