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Gene : AT1G68660 A. thaliana

DB identifier  ? AT1G68660 Secondary Identifier  ? locus:2026869
Brief Description  Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
TAIR Computational Description  Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11)
TAIR Curator Summary  ClpS1 is a member of the caseionolytic proteinase S family of N-recognins. It is involved in proteolysis in the chloroplast stroma. An arginine residue (Arg50) controls low-affinity substrate binding.
TAIR Short Description  Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
TAIR Aliases  AtClpS1, ClpS1

3 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1399  
Location: Chr1:25777851-25779249 reverse strand

Gene models - AT1G68660 AT1G68660

? Gene models

Transcripts: 2  Exons: 7  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CLPS1_ARATH-2 CLPS1_ARATH developmental stage Not detected in senescing leaves.
CLPS1_ARATH-2 CLPS1_ARATH function Small adapter protein that modulate the activity of CLPC (By similarity). Involved in plastid biogenesis in particular when chloroplast protein synthesis capacity is a limiting factor (PubMed:23898032). Probably involved in substrate selection for plastid Clp protease system (PubMed:23898032). Recruitment to ClpC chaperones is facilitated by CLPF thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC) (PubMed:26419670).
CLPS1_ARATH-2 CLPS1_ARATH similarity Belongs to the ClpS family.
CLPS1_ARATH-2 CLPS1_ARATH tissue specificity Expressed exclusively in photosynthetic green tissues with high levels in young, developing leaf tissues.

3 Proteins

Function

Gene Ontology

cellular component
chloroplast stroma  ? ECO  
molecular function
peptidase activity  ? ECO  
protein-macromolecule adaptor activity  ? ECO  
biological process
positive regulation of proteolysis involved in protein catabolic process  ? ECO  
proteolysis  ? ECO  
protein catabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets