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Gene : AT1G68240 A. thaliana

DB identifier  ? AT1G68240 Secondary Identifier  ? locus:2199307
Brief Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR Computational Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  basic helix-loop-helix (bHLH) DNA-binding superfamily protein

0 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1266  
Location: Chr1:25574864-25576129 reverse strand

Gene models - AT1G68240 AT1G68240

? Gene models

Transcripts: 2  Exons: 9  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BH109_ARATH-3 BH109_ARATH BH109_ARATH-2 developmental stage Expressed during somatic embryogenesis.
BH109_ARATH-3 BH109_ARATH BH109_ARATH-2 function Transcription factor involved in somatic embryogenesis. Acts as a positive regulator of somatic embryo formation (PubMed:23874927, PubMed:26973252). Acts as a positive regulator of ECP63 by targeting its promoter and inducing its expression (PubMed:26973252).
BH109_ARATH-3 BH109_ARATH BH109_ARATH-2 similarity Belongs to the bHLH protein family.

3 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
DNA binding  ? ECO  
protein dimerization activity  ? ECO  
biological process
regulation of DNA-templated transcription  ? ECO  
somatic embryogenesis  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets