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Gene : emb1688 A. thaliana

DB identifier  ? AT1G67440 Secondary Identifier  ? locus:2197618
Name  ? embryo defective 1688 Brief Description  Minichromosome maintenance (MCM2/3/5) family protein
TAIR Computational Description  Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11)
TAIR Curator Summary  Homolog of bacterial rsgA, functions in chloroplast ribosome biogenesis.
TAIR Short Description  Minichromosome maintenance (MCM2/3/5) family protein
TAIR Aliases  emb1688, rsgA

1 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2105  
Location: Chr1:25263757-25265861 reverse strand

Gene models - emb1688 AT1G67440

? Gene models

Transcripts: 2  Exons: 10  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RSGA1_ARATH function One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit (By similarity). Required for embryo development (PubMed:15266054).
RSGA1_ARATH similarity Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.

2 Proteins

Function

Gene Ontology

cellular component
mitochondrion  ? ECO  
molecular function
rRNA binding  ? ECO  
GTPase activity  ? ECO  
GTP binding  ? ECO  
metal ion binding  ? ECO  
biological process
chloroplast organization  ? ECO  
ribosome biogenesis  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets