External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65120:CDS:13 | 90 | Chr1: 24191457-24191546 | Arabidopsis thaliana |
AT1G65120:CDS:12 | 90 | Chr1: 24191645-24191734 | Arabidopsis thaliana |
AT1G65120:CDS:10 | 134 | Chr1: 24191823-24191956 | Arabidopsis thaliana |
AT1G65120:CDS:9 | 148 | Chr1: 24192053-24192200 | Arabidopsis thaliana |
AT1G65120:CDS:8 | 207 | Chr1: 24192289-24192495 | Arabidopsis thaliana |
AT1G65120:CDS:7 | 198 | Chr1: 24192580-24192777 | Arabidopsis thaliana |
AT1G65120:CDS:6 | 101 | Chr1: 24192906-24193006 | Arabidopsis thaliana |
AT1G65120:CDS:5 | 152 | Chr1: 24193088-24193239 | Arabidopsis thaliana |
AT1G65120:CDS:4 | 35 | Chr1: 24193343-24193377 | Arabidopsis thaliana |
AT1G65120:CDS:3 | 135 | Chr1: 24193464-24193598 | Arabidopsis thaliana |
AT1G65120:CDS:2 | 129 | Chr1: 24193681-24193809 | Arabidopsis thaliana |
AT1G65120:CDS:1 | 2025 | Chr1: 24193883-24195907 | Arabidopsis thaliana |
AT1G65120:CDS:11 | 236 | Chr1: 24191721-24191956 | Arabidopsis thaliana |
AT1G65120:CDS:9.1 | 148 | Chr1: 24192053-24192200 | Arabidopsis thaliana |
AT1G65120:CDS:8.1 | 207 | Chr1: 24192289-24192495 | Arabidopsis thaliana |
AT1G65120:CDS:7.1 | 198 | Chr1: 24192580-24192777 | Arabidopsis thaliana |
AT1G65120:CDS:6.1 | 101 | Chr1: 24192906-24193006 | Arabidopsis thaliana |
AT1G65120:CDS:5.1 | 152 | Chr1: 24193088-24193239 | Arabidopsis thaliana |
AT1G65120:CDS:4.1 | 35 | Chr1: 24193343-24193377 | Arabidopsis thaliana |
AT1G65120:CDS:3.1 | 135 | Chr1: 24193464-24193598 | Arabidopsis thaliana |
AT1G65120:CDS:2.1 | 129 | Chr1: 24193681-24193809 | Arabidopsis thaliana |
AT1G65120:CDS:1.1 | 2025 | Chr1: 24193883-24195907 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65120:exon:15 | 368 | Chr1: 24191179-24191546 | Arabidopsis thaliana |
AT1G65120:exon:13 | 90 | Chr1: 24191645-24191734 | Arabidopsis thaliana |
AT1G65120:exon:11 | 134 | Chr1: 24191823-24191956 | Arabidopsis thaliana |
AT1G65120:exon:2 | 2438 | Chr1: 24193883-24196320 | Arabidopsis thaliana |
AT1G65120:exon:14 | 199 | Chr1: 24191348-24191546 | Arabidopsis thaliana |
AT1G65120:exon:12 | 312 | Chr1: 24191645-24191956 | Arabidopsis thaliana |
AT1G65120:exon:10 | 148 | Chr1: 24192053-24192200 | Arabidopsis thaliana |
AT1G65120:exon:9 | 207 | Chr1: 24192289-24192495 | Arabidopsis thaliana |
AT1G65120:exon:8 | 198 | Chr1: 24192580-24192777 | Arabidopsis thaliana |
AT1G65120:exon:7 | 101 | Chr1: 24192906-24193006 | Arabidopsis thaliana |
AT1G65120:exon:6 | 152 | Chr1: 24193088-24193239 | Arabidopsis thaliana |
AT1G65120:exon:5 | 35 | Chr1: 24193343-24193377 | Arabidopsis thaliana |
AT1G65120:exon:4 | 135 | Chr1: 24193464-24193598 | Arabidopsis thaliana |
AT1G65120:exon:3 | 129 | Chr1: 24193681-24193809 | Arabidopsis thaliana |
AT1G65120:exon:1 | 2455 | Chr1: 24193883-24196337 | Arabidopsis thaliana |
AT1G08737:exon:1 | 104 | Chr1: 24194483-24194586 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65120:five_prime_UTR:2 | 413 | Chr1: 24195908-24196320 | Arabidopsis thaliana |
AT1G65120:five_prime_UTR:1 | 430 | Chr1: 24195908-24196337 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G08737 | U5-2 | 104 | Chr1: 24194483-24194586 | A. thaliana | U5;(source:Araport11) | NULL | U5-2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G65120.2 | 4135 | Chr1: 24191179-24196320 |
AT1G65120.1 | 4071 | Chr1: 24191348-24196337 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65120:three_prime_UTR:3 | 278 | Chr1: 24191179-24191456 | Arabidopsis thaliana |
AT1G65120:three_prime_UTR:2 | 199 | Chr1: 24191348-24191546 | Arabidopsis thaliana |
AT1G65120:three_prime_UTR:1 | 76 | Chr1: 24191645-24191720 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
cysteine-type deubiquitinase activity | ECO |
biological process | |
protein deubiquitination | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...