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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65090:CDS:7 | 300 | Chr1: 24180973-24181272 | Arabidopsis thaliana |
AT1G65090:CDS:5 | 84 | Chr1: 24181353-24181436 | Arabidopsis thaliana |
AT1G65090:CDS:4 | 111 | Chr1: 24181513-24181623 | Arabidopsis thaliana |
AT1G65090:CDS:2 | 68 | Chr1: 24181955-24182022 | Arabidopsis thaliana |
AT1G65090:CDS:1 | 577 | Chr1: 24182092-24182668 | Arabidopsis thaliana |
AT1G65090:CDS:6 | 8 | Chr1: 24181187-24181194 | Arabidopsis thaliana |
AT1G65090:CDS:3 | 88 | Chr1: 24181536-24181623 | Arabidopsis thaliana |
AT1G65090:CDS:2.1 | 68 | Chr1: 24181955-24182022 | Arabidopsis thaliana |
AT1G65090:CDS:1.1 | 577 | Chr1: 24182092-24182668 | Arabidopsis thaliana |
AT1G65090:CDS:8 | 222 | Chr1: 24180973-24181194 | Arabidopsis thaliana |
AT1G65090:CDS:2.2 | 68 | Chr1: 24181955-24182022 | Arabidopsis thaliana |
AT1G65090:CDS:1.2 | 577 | Chr1: 24182092-24182668 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65080:exon:13 | 296 | Chr1: 24180576-24180871 | Arabidopsis thaliana |
AT1G65090:exon:10 | 443 | Chr1: 24180830-24181272 | Arabidopsis thaliana |
AT1G65090:exon:8 | 84 | Chr1: 24181353-24181436 | Arabidopsis thaliana |
AT1G65090:exon:7 | 111 | Chr1: 24181513-24181623 | Arabidopsis thaliana |
AT1G65090:exon:3 | 112 | Chr1: 24183088-24183199 | Arabidopsis thaliana |
AT1G65090:exon:11 | 365 | Chr1: 24180830-24181194 | Arabidopsis thaliana |
AT1G65090:exon:6 | 88 | Chr1: 24181536-24181623 | Arabidopsis thaliana |
AT1G65090:exon:2 | 163 | Chr1: 24183088-24183250 | Arabidopsis thaliana |
AT1G65090:exon:9 | 319 | Chr1: 24180876-24181194 | Arabidopsis thaliana |
AT1G65090:exon:5 | 68 | Chr1: 24181955-24182022 | Arabidopsis thaliana |
AT1G65090:exon:4 | 600 | Chr1: 24182092-24182691 | Arabidopsis thaliana |
AT1G65090:exon:1 | 213 | Chr1: 24183088-24183300 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65090:five_prime_UTR:3 | 112 | Chr1: 24183088-24183199 | Arabidopsis thaliana |
AT1G65090:five_prime_UTR:2 | 163 | Chr1: 24183088-24183250 | Arabidopsis thaliana |
AT1G65090:five_prime_UTR:4 | 23 | Chr1: 24182669-24182691 | Arabidopsis thaliana |
AT1G65090:five_prime_UTR:1 | 213 | Chr1: 24183088-24183300 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G65080 | locus:2014973 | AT1G65080 | 4309 | Chr1: 24176563-24180871 | A. thaliana | Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein;(source:Araport11) | Structurally distinct member of Oxa1 superfamily , has tetratricopeptide repeat (TPR) domain at the C terminus. Paralog of OXA2b.Involved in maturation of mitochondrial cytochrome c. | Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain | OXA2a |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G65080.1 | 1776 | Chr1: 24176563-24180871 |
AT1G65090.2 | 1418 | Chr1: 24180830-24183199 |
AT1G65090.1 | 1284 | Chr1: 24180830-24183250 |
AT1G65090.3 | 1200 | Chr1: 24180876-24183300 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G65080:three_prime_UTR:1 | 142 | Chr1: 24180730-24180871 | Arabidopsis thaliana |
AT1G65090:three_prime_UTR:3 | 143 | Chr1: 24180830-24180972 | Arabidopsis thaliana |
AT1G65090:three_prime_UTR:2 | 357 | Chr1: 24180830-24181186 | Arabidopsis thaliana |
AT1G65090:three_prime_UTR:1 | 97 | Chr1: 24180876-24180972 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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