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Gene : ISPF A. thaliana

DB identifier  ? AT1G63970 Secondary Identifier  ? locus:2024618
Name  ? isoprenoid F Brief Description  isoprenoid F
TAIR Computational Description  isoprenoid F;(source:Araport11)
TAIR Curator Summary  Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF
TAIR Short Description  isoprenoid F
TAIR Aliases  ISPF, MECPS

1 Gene Rifs

1 Organism

21 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1712  
Location: Chr1:23738673-23740384 reverse strand

Gene models - ISPF AT1G63970

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ISPF_ARATH-2 ISPF_ARATH function Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate into 2C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP. Is essential for chloroplast development.
ISPF_ARATH-2 ISPF_ARATH A0A2H1ZEF4_ARATH pathway Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 4/6.
ISPF_ARATH-2 ISPF_ARATH similarity Belongs to the IspF family.

3 Proteins

Function

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets