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Gene : Phox2 A. thaliana

DB identifier  ? AT1G62390 Secondary Identifier  ? locus:2027104
Name  ? Phox2 Brief Description  Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
TAIR Computational Description  Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein;(source:Araport11)
TAIR Curator Summary  Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.
TAIR Short Description  Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
TAIR Aliases  CLMP1, Phox2

0 Gene Rifs

1 Organism

20 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2849  
Location: Chr1:23084293-23087141 reverse strand

Gene models - Phox2 AT1G62390

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PHOX2_ARATH function Required for plastid separation and partitioning during cell division (PubMed:22025705). Not involved in plastid constriction or in the organization of cytoplasmic actin cables (PubMed:22025705). Contributes to polar growth of root hairs (PubMed:28096376).
PHOX2_ARATH subcellular location Localized to distinct foci in the cytoplasm, which frequently colocalize with the cell periphery and with chloroplasts.
PHOX2_ARATH tissue specificity Expressed in roots, stems, leaves, apex, flowers and seeds (PubMed:20856808). Detected throughout the petiole in juvenile and young leaves, but restricted to the petiole midvein in older leaves (PubMed:22025705). Expressed in hydathodes, at the base of the trichome, in the vascular cylinder of primary root and lateral root, in emerging lateral root primordia, in pollen and in developing embryos, but not in mature embryos (PubMed:22025705).

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
mRNA binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets