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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61660:CDS:12 | 4 | Chr1: 22754003-22754006 | Arabidopsis thaliana |
AT1G61660:CDS:10 | 152 | Chr1: 22754370-22754521 | Arabidopsis thaliana |
AT1G61660:CDS:8 | 54 | Chr1: 22754621-22754674 | Arabidopsis thaliana |
AT1G61660:CDS:7 | 66 | Chr1: 22754769-22754834 | Arabidopsis thaliana |
AT1G61660:CDS:5 | 66 | Chr1: 22754964-22755029 | Arabidopsis thaliana |
AT1G61660:CDS:3 | 108 | Chr1: 22755116-22755223 | Arabidopsis thaliana |
AT1G61660:CDS:2 | 409 | Chr1: 22755320-22755728 | Arabidopsis thaliana |
AT1G61660:CDS:1 | 323 | Chr1: 22755849-22756171 | Arabidopsis thaliana |
AT1G61660:CDS:6 | 150 | Chr1: 22754880-22755029 | Arabidopsis thaliana |
AT1G61660:CDS:3.1 | 108 | Chr1: 22755116-22755223 | Arabidopsis thaliana |
AT1G61660:CDS:2.1 | 409 | Chr1: 22755320-22755728 | Arabidopsis thaliana |
AT1G61660:CDS:1.1 | 323 | Chr1: 22755849-22756171 | Arabidopsis thaliana |
AT1G61660:CDS:9 | 72 | Chr1: 22754603-22754674 | Arabidopsis thaliana |
AT1G61660:CDS:7.1 | 66 | Chr1: 22754769-22754834 | Arabidopsis thaliana |
AT1G61660:CDS:5.1 | 66 | Chr1: 22754964-22755029 | Arabidopsis thaliana |
AT1G61660:CDS:3.2 | 108 | Chr1: 22755116-22755223 | Arabidopsis thaliana |
AT1G61660:CDS:2.2 | 409 | Chr1: 22755320-22755728 | Arabidopsis thaliana |
AT1G61660:CDS:1.2 | 323 | Chr1: 22755849-22756171 | Arabidopsis thaliana |
AT1G61660:CDS:11 | 156 | Chr1: 22754366-22754521 | Arabidopsis thaliana |
AT1G61660:CDS:8.1 | 54 | Chr1: 22754621-22754674 | Arabidopsis thaliana |
AT1G61660:CDS:7.2 | 66 | Chr1: 22754769-22754834 | Arabidopsis thaliana |
AT1G61660:CDS:5.2 | 66 | Chr1: 22754964-22755029 | Arabidopsis thaliana |
AT1G61660:CDS:3.3 | 108 | Chr1: 22755116-22755223 | Arabidopsis thaliana |
AT1G61660:CDS:2.3 | 409 | Chr1: 22755320-22755728 | Arabidopsis thaliana |
AT1G61660:CDS:1.3 | 323 | Chr1: 22755849-22756171 | Arabidopsis thaliana |
AT1G61660:CDS:9.1 | 72 | Chr1: 22754603-22754674 | Arabidopsis thaliana |
AT1G61660:CDS:7.3 | 66 | Chr1: 22754769-22754834 | Arabidopsis thaliana |
AT1G61660:CDS:5.3 | 66 | Chr1: 22754964-22755029 | Arabidopsis thaliana |
AT1G61660:CDS:3.4 | 108 | Chr1: 22755116-22755223 | Arabidopsis thaliana |
AT1G61660:CDS:2.4 | 409 | Chr1: 22755320-22755728 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61660:exon:21 | 396 | Chr1: 22753611-22754006 | Arabidopsis thaliana |
AT1G61660:exon:14 | 152 | Chr1: 22754370-22754521 | Arabidopsis thaliana |
AT1G61660:exon:2 | 523 | Chr1: 22755849-22756371 | Arabidopsis thaliana |
AT1G61660:exon:20 | 823 | Chr1: 22753699-22754521 | Arabidopsis thaliana |
AT1G61660:exon:10 | 261 | Chr1: 22754769-22755029 | Arabidopsis thaliana |
AT1G61660:exon:19 | 976 | Chr1: 22753699-22754674 | Arabidopsis thaliana |
AT1G61660:exon:3 | 518 | Chr1: 22755849-22756366 | Arabidopsis thaliana |
AT1G61660:exon:18 | 817 | Chr1: 22753705-22754521 | Arabidopsis thaliana |
AT1G61660:exon:1 | 539 | Chr1: 22755849-22756387 | Arabidopsis thaliana |
AT1G61660:exon:17 | 288 | Chr1: 22753719-22754006 | Arabidopsis thaliana |
AT1G61660:exon:13 | 305 | Chr1: 22754370-22754674 | Arabidopsis thaliana |
AT1G61660:exon:5 | 447 | Chr1: 22755849-22756295 | Arabidopsis thaliana |
AT1G61660:exon:7 | 108 | Chr1: 22755116-22755223 | Arabidopsis thaliana |
AT1G61660:exon:16 | 271 | Chr1: 22753736-22754006 | Arabidopsis thaliana |
AT1G61660:exon:15 | 161 | Chr1: 22754361-22754521 | Arabidopsis thaliana |
AT1G61660:exon:12 | 54 | Chr1: 22754621-22754674 | Arabidopsis thaliana |
AT1G61660:exon:11 | 66 | Chr1: 22754769-22754834 | Arabidopsis thaliana |
AT1G61660:exon:9 | 66 | Chr1: 22754964-22755029 | Arabidopsis thaliana |
AT1G61660:exon:8 | 99 | Chr1: 22755116-22755214 | Arabidopsis thaliana |
AT1G61660:exon:6 | 409 | Chr1: 22755320-22755728 | Arabidopsis thaliana |
AT1G61660:exon:4 | 452 | Chr1: 22755849-22756300 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61660:five_prime_UTR:2 | 200 | Chr1: 22756172-22756371 | Arabidopsis thaliana |
AT1G61660:five_prime_UTR:3 | 195 | Chr1: 22756172-22756366 | Arabidopsis thaliana |
AT1G61660:five_prime_UTR:1 | 216 | Chr1: 22756172-22756387 | Arabidopsis thaliana |
AT1G61660:five_prime_UTR:5 | 124 | Chr1: 22756172-22756295 | Arabidopsis thaliana |
AT1G61660:five_prime_UTR:4 | 129 | Chr1: 22756172-22756300 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G61660.1 | 1774 | Chr1: 22753611-22756371 |
AT1G61660.5 | 2173 | Chr1: 22753699-22756366 |
AT1G61660.6 | 2143 | Chr1: 22753699-22756366 |
AT1G61660.7 | 2059 | Chr1: 22753705-22756387 |
AT1G61660.2 | 1689 | Chr1: 22753719-22756295 |
AT1G61660.4 | 1521 | Chr1: 22753736-22756300 |
AT1G61660.3 | 1578 | Chr1: 22753736-22756300 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61660:three_prime_UTR:10 | 392 | Chr1: 22753611-22754002 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:9 | 823 | Chr1: 22753699-22754521 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:2 | 54 | Chr1: 22754621-22754674 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:1 | 111 | Chr1: 22754769-22754879 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:8 | 904 | Chr1: 22753699-22754602 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:7 | 661 | Chr1: 22753705-22754365 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:6 | 288 | Chr1: 22753719-22754006 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:3 | 233 | Chr1: 22754370-22754602 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:5 | 271 | Chr1: 22753736-22754006 | Arabidopsis thaliana |
AT1G61660:three_prime_UTR:4 | 5 | Chr1: 22754361-22754365 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
sequence-specific DNA binding | ECO |
DNA-binding transcription factor activity | ECO |
RNA polymerase II cis-regulatory region sequence-specific DNA binding | ECO |
protein dimerization activity | ECO |
biological process | |
cellular response to abscisic acid stimulus | ECO |
positive regulation of DNA-templated transcription | ECO |
cellular response to salt stress | ECO |
regulation of reactive oxygen species metabolic process | ECO |
regulation of proline metabolic process | ECO |
cellular response to water deprivation | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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