External Links
- Aracyc
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- Plant Proteome Database
- SUBA
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- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
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- Plaza
- pep2pro
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- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61140:CDS:15 | 111 | Chr1: 22535038-22535148 | Arabidopsis thaliana |
AT1G61140:CDS:14 | 210 | Chr1: 22535241-22535450 | Arabidopsis thaliana |
AT1G61140:CDS:13 | 552 | Chr1: 22535554-22536105 | Arabidopsis thaliana |
AT1G61140:CDS:11 | 192 | Chr1: 22536371-22536562 | Arabidopsis thaliana |
AT1G61140:CDS:10 | 131 | Chr1: 22536709-22536839 | Arabidopsis thaliana |
AT1G61140:CDS:9 | 889 | Chr1: 22536923-22537811 | Arabidopsis thaliana |
AT1G61140:CDS:8 | 78 | Chr1: 22537902-22537979 | Arabidopsis thaliana |
AT1G61140:CDS:7 | 72 | Chr1: 22538203-22538274 | Arabidopsis thaliana |
AT1G61140:CDS:6 | 1127 | Chr1: 22538539-22539665 | Arabidopsis thaliana |
AT1G61140:CDS:4 | 264 | Chr1: 22539777-22540040 | Arabidopsis thaliana |
AT1G61140:CDS:3 | 70 | Chr1: 22540148-22540217 | Arabidopsis thaliana |
AT1G61140:CDS:1 | 147 | Chr1: 22540464-22540610 | Arabidopsis thaliana |
AT1G61140:CDS:15.1 | 111 | Chr1: 22535038-22535148 | Arabidopsis thaliana |
AT1G61140:CDS:14.1 | 210 | Chr1: 22535241-22535450 | Arabidopsis thaliana |
AT1G61140:CDS:13.1 | 552 | Chr1: 22535554-22536105 | Arabidopsis thaliana |
AT1G61140:CDS:11.1 | 192 | Chr1: 22536371-22536562 | Arabidopsis thaliana |
AT1G61140:CDS:10.1 | 131 | Chr1: 22536709-22536839 | Arabidopsis thaliana |
AT1G61140:CDS:9.1 | 889 | Chr1: 22536923-22537811 | Arabidopsis thaliana |
AT1G61140:CDS:8.1 | 78 | Chr1: 22537902-22537979 | Arabidopsis thaliana |
AT1G61140:CDS:7.1 | 72 | Chr1: 22538203-22538274 | Arabidopsis thaliana |
AT1G61140:CDS:6.1 | 1127 | Chr1: 22538539-22539665 | Arabidopsis thaliana |
AT1G61140:CDS:5 | 7 | Chr1: 22539750-22539756 | Arabidopsis thaliana |
AT1G61140:CDS:12 | 270 | Chr1: 22536293-22536562 | Arabidopsis thaliana |
AT1G61140:CDS:10.2 | 131 | Chr1: 22536709-22536839 | Arabidopsis thaliana |
AT1G61140:CDS:9.2 | 889 | Chr1: 22536923-22537811 | Arabidopsis thaliana |
AT1G61140:CDS:8.2 | 78 | Chr1: 22537902-22537979 | Arabidopsis thaliana |
AT1G61140:CDS:7.2 | 72 | Chr1: 22538203-22538274 | Arabidopsis thaliana |
AT1G61140:CDS:6.2 | 1127 | Chr1: 22538539-22539665 | Arabidopsis thaliana |
AT1G61140:CDS:4.1 | 264 | Chr1: 22539777-22540040 | Arabidopsis thaliana |
AT1G61140:CDS:3.1 | 70 | Chr1: 22540148-22540217 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61140:exon:17 | 486 | Chr1: 22534663-22535148 | Arabidopsis thaliana |
AT1G61140:exon:2 | 469 | Chr1: 22540464-22540932 | Arabidopsis thaliana |
AT1G61140:exon:16 | 443 | Chr1: 22534706-22535148 | Arabidopsis thaliana |
AT1G61140:exon:15 | 210 | Chr1: 22535241-22535450 | Arabidopsis thaliana |
AT1G61140:exon:14 | 552 | Chr1: 22535554-22536105 | Arabidopsis thaliana |
AT1G61140:exon:12 | 192 | Chr1: 22536371-22536562 | Arabidopsis thaliana |
AT1G61140:exon:6 | 291 | Chr1: 22539750-22540040 | Arabidopsis thaliana |
AT1G61140:exon:1 | 470 | Chr1: 22540464-22540933 | Arabidopsis thaliana |
AT1G61140:exon:13 | 480 | Chr1: 22536083-22536562 | Arabidopsis thaliana |
AT1G61140:exon:11 | 131 | Chr1: 22536709-22536839 | Arabidopsis thaliana |
AT1G61140:exon:10 | 889 | Chr1: 22536923-22537811 | Arabidopsis thaliana |
AT1G61140:exon:9 | 78 | Chr1: 22537902-22537979 | Arabidopsis thaliana |
AT1G61140:exon:8 | 72 | Chr1: 22538203-22538274 | Arabidopsis thaliana |
AT1G61140:exon:7 | 1127 | Chr1: 22538539-22539665 | Arabidopsis thaliana |
AT1G61140:exon:5 | 264 | Chr1: 22539777-22540040 | Arabidopsis thaliana |
AT1G61140:exon:4 | 70 | Chr1: 22540148-22540217 | Arabidopsis thaliana |
AT1G61140:exon:3 | 168 | Chr1: 22540443-22540610 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61140:five_prime_UTR:1 | 322 | Chr1: 22540611-22540932 | Arabidopsis thaliana |
AT1G61140:five_prime_UTR:4 | 284 | Chr1: 22539757-22540040 | Arabidopsis thaliana |
AT1G61140:five_prime_UTR:3 | 70 | Chr1: 22540148-22540217 | Arabidopsis thaliana |
AT1G61140:five_prime_UTR:2 | 470 | Chr1: 22540464-22540933 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G61140.1 | 4540 | Chr1: 22534663-22540932 |
AT1G61140.3 | 4525 | Chr1: 22534706-22540933 |
AT1G61140.2 | 3279 | Chr1: 22536083-22540610 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61140:three_prime_UTR:3 | 375 | Chr1: 22534663-22535037 | Arabidopsis thaliana |
AT1G61140:three_prime_UTR:2 | 332 | Chr1: 22534706-22535037 | Arabidopsis thaliana |
AT1G61140:three_prime_UTR:1 | 210 | Chr1: 22536083-22536292 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
F4HTG1_ARATH B3H7J3_ARATH | similarity | Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
ATP-dependent chromatin remodeler activity | ECO |
helicase activity | ECO |
hydrolase activity | ECO |
metal ion binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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