help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.Your session has expired. If you were not logged in, your data (including query history and any lists you made) has been cleared.

Gene : EDA16 A. thaliana

DB identifier  ? AT1G61140 Secondary Identifier  ? locus:2008470
Name  ? embryo sac development arrest 16 Brief Description  SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein
TAIR Computational Description  SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
TAIR Aliases  EDA16, FRG4

1 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 6271  
Location: Chr1:22534663-22540933 reverse strand

Gene models - EDA16 AT1G61140

? Gene models

Transcripts: 3  Exons: 33  Introns: 30 

Overlapping Features

? Genome features that overlap coordinates of this Gene

20 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
F4HTG1_ARATH B3H7J3_ARATH similarity Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.

3 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
ATP binding  ? ECO  
ATP-dependent chromatin remodeler activity  ? ECO  
helicase activity  ? ECO  
hydrolase activity  ? ECO  
metal ion binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets