External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61080:CDS:12 | 201 | Chr1: 22493194-22493394 | Arabidopsis thaliana |
AT1G61080:CDS:10 | 153 | Chr1: 22493483-22493635 | Arabidopsis thaliana |
AT1G61080:CDS:9 | 165 | Chr1: 22493732-22493896 | Arabidopsis thaliana |
AT1G61080:CDS:8 | 1685 | Chr1: 22493993-22495677 | Arabidopsis thaliana |
AT1G61080:CDS:7 | 124 | Chr1: 22495768-22495891 | Arabidopsis thaliana |
AT1G61080:CDS:6 | 96 | Chr1: 22495981-22496076 | Arabidopsis thaliana |
AT1G61080:CDS:4 | 336 | Chr1: 22496165-22496500 | Arabidopsis thaliana |
AT1G61080:CDS:1 | 72 | Chr1: 22496984-22497055 | Arabidopsis thaliana |
AT1G61080:CDS:12.1 | 201 | Chr1: 22493194-22493394 | Arabidopsis thaliana |
AT1G61080:CDS:10.1 | 153 | Chr1: 22493483-22493635 | Arabidopsis thaliana |
AT1G61080:CDS:9.1 | 165 | Chr1: 22493732-22493896 | Arabidopsis thaliana |
AT1G61080:CDS:8.1 | 1685 | Chr1: 22493993-22495677 | Arabidopsis thaliana |
AT1G61080:CDS:7.1 | 124 | Chr1: 22495768-22495891 | Arabidopsis thaliana |
AT1G61080:CDS:6.1 | 96 | Chr1: 22495981-22496076 | Arabidopsis thaliana |
AT1G61080:CDS:3 | 339 | Chr1: 22496165-22496503 | Arabidopsis thaliana |
AT1G61080:CDS:2 | 36 | Chr1: 22496984-22497019 | Arabidopsis thaliana |
AT1G61080:CDS:12.2 | 201 | Chr1: 22493194-22493394 | Arabidopsis thaliana |
AT1G61080:CDS:10.2 | 153 | Chr1: 22493483-22493635 | Arabidopsis thaliana |
AT1G61080:CDS:9.2 | 165 | Chr1: 22493732-22493896 | Arabidopsis thaliana |
AT1G61080:CDS:8.2 | 1685 | Chr1: 22493993-22495677 | Arabidopsis thaliana |
AT1G61080:CDS:7.2 | 124 | Chr1: 22495768-22495891 | Arabidopsis thaliana |
AT1G61080:CDS:6.2 | 96 | Chr1: 22495981-22496076 | Arabidopsis thaliana |
AT1G61080:CDS:4.1 | 336 | Chr1: 22496165-22496500 | Arabidopsis thaliana |
AT1G61080:CDS:2.1 | 36 | Chr1: 22496984-22497019 | Arabidopsis thaliana |
AT1G61080:CDS:12.3 | 201 | Chr1: 22493194-22493394 | Arabidopsis thaliana |
AT1G61080:CDS:10.3 | 153 | Chr1: 22493483-22493635 | Arabidopsis thaliana |
AT1G61080:CDS:9.3 | 165 | Chr1: 22493732-22493896 | Arabidopsis thaliana |
AT1G61080:CDS:8.3 | 1685 | Chr1: 22493993-22495677 | Arabidopsis thaliana |
AT1G61080:CDS:7.3 | 124 | Chr1: 22495768-22495891 | Arabidopsis thaliana |
AT1G61080:CDS:6.3 | 96 | Chr1: 22495981-22496076 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61080:exon:19 | 517 | Chr1: 22492878-22493394 | Arabidopsis thaliana |
AT1G61080:exon:1 | 284 | Chr1: 22496984-22497267 | Arabidopsis thaliana |
AT1G61080:exon:4 | 59 | Chr1: 22496984-22497042 | Arabidopsis thaliana |
AT1G61080:exon:18 | 512 | Chr1: 22492883-22493394 | Arabidopsis thaliana |
AT1G61080:exon:7 | 336 | Chr1: 22496165-22496500 | Arabidopsis thaliana |
AT1G61080:exon:3 | 63 | Chr1: 22496984-22497046 | Arabidopsis thaliana |
AT1G61080:exon:17 | 504 | Chr1: 22492891-22493394 | Arabidopsis thaliana |
AT1G61080:exon:6 | 339 | Chr1: 22496165-22496503 | Arabidopsis thaliana |
AT1G61080:exon:2 | 84 | Chr1: 22496984-22497067 | Arabidopsis thaliana |
AT1G61080:exon:16 | 486 | Chr1: 22492909-22493394 | Arabidopsis thaliana |
AT1G61080:exon:13 | 153 | Chr1: 22493483-22493635 | Arabidopsis thaliana |
AT1G61080:exon:15 | 262 | Chr1: 22493133-22493394 | Arabidopsis thaliana |
AT1G61080:exon:14 | 54 | Chr1: 22493483-22493536 | Arabidopsis thaliana |
AT1G61080:exon:12 | 165 | Chr1: 22493732-22493896 | Arabidopsis thaliana |
AT1G61080:exon:11 | 1685 | Chr1: 22493993-22495677 | Arabidopsis thaliana |
AT1G61080:exon:10 | 124 | Chr1: 22495768-22495891 | Arabidopsis thaliana |
AT1G61080:exon:9 | 96 | Chr1: 22495981-22496076 | Arabidopsis thaliana |
AT1G61080:exon:8 | 363 | Chr1: 22496138-22496500 | Arabidopsis thaliana |
AT1G61080:exon:5 | 36 | Chr1: 22496984-22497019 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61080:five_prime_UTR:1 | 212 | Chr1: 22497056-22497267 | Arabidopsis thaliana |
AT1G61080:five_prime_UTR:4 | 23 | Chr1: 22497020-22497042 | Arabidopsis thaliana |
AT1G61080:five_prime_UTR:3 | 27 | Chr1: 22497020-22497046 | Arabidopsis thaliana |
AT1G61080:five_prime_UTR:2 | 12 | Chr1: 22497056-22497067 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G61080.2 | 3360 | Chr1: 22492878-22497267 |
AT1G61080.4 | 3133 | Chr1: 22492883-22497042 |
AT1G61080.3 | 3134 | Chr1: 22492883-22497046 |
AT1G61080.5 | 3150 | Chr1: 22492891-22497067 |
AT1G61080.6 | 3108 | Chr1: 22492909-22497019 |
AT1G61080.1 | 2785 | Chr1: 22493133-22497019 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61080:three_prime_UTR:5 | 316 | Chr1: 22492878-22493193 | Arabidopsis thaliana |
AT1G61080:three_prime_UTR:4 | 311 | Chr1: 22492883-22493193 | Arabidopsis thaliana |
AT1G61080:three_prime_UTR:3 | 303 | Chr1: 22492891-22493193 | Arabidopsis thaliana |
AT1G61080:three_prime_UTR:2 | 285 | Chr1: 22492909-22493193 | Arabidopsis thaliana |
AT1G61080:three_prime_UTR:1 | 61 | Chr1: 22493133-22493193 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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