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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNA: 1, CDSs: 35, Exons: 19, Five Prime UTRs: 5, Genes: 2, mRNAs: 6, Three Prime UTRs: 4
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60670:CDS:1 | 203 | Chr1: 22344099-22344301 | Arabidopsis thaliana |
AT1G60670:CDS:2 | 100 | Chr1: 22344635-22344734 | Arabidopsis thaliana |
AT1G60670:CDS:4 | 57 | Chr1: 22345599-22345655 | Arabidopsis thaliana |
AT1G60670:CDS:5 | 106 | Chr1: 22345818-22345923 | Arabidopsis thaliana |
AT1G60670:CDS:6 | 83 | Chr1: 22346257-22346339 | Arabidopsis thaliana |
AT1G60670:CDS:7 | 62 | Chr1: 22346540-22346601 | Arabidopsis thaliana |
AT1G60670:CDS:10 | 97 | Chr1: 22346717-22346813 | Arabidopsis thaliana |
AT1G60670:CDS:12 | 57 | Chr1: 22347084-22347140 | Arabidopsis thaliana |
AT1G60670:CDS:1.1 | 203 | Chr1: 22344099-22344301 | Arabidopsis thaliana |
AT1G60670:CDS:2.1 | 100 | Chr1: 22344635-22344734 | Arabidopsis thaliana |
AT1G60670:CDS:4.1 | 57 | Chr1: 22345599-22345655 | Arabidopsis thaliana |
AT1G60670:CDS:5.1 | 106 | Chr1: 22345818-22345923 | Arabidopsis thaliana |
AT1G60670:CDS:6.1 | 83 | Chr1: 22346257-22346339 | Arabidopsis thaliana |
AT1G60670:CDS:8 | 96 | Chr1: 22346540-22346635 | Arabidopsis thaliana |
AT1G60670:CDS:1.2 | 203 | Chr1: 22344099-22344301 | Arabidopsis thaliana |
AT1G60670:CDS:2.2 | 100 | Chr1: 22344635-22344734 | Arabidopsis thaliana |
AT1G60670:CDS:3 | 42 | Chr1: 22345599-22345640 | Arabidopsis thaliana |
AT1G60670:CDS:5.2 | 106 | Chr1: 22345818-22345923 | Arabidopsis thaliana |
AT1G60670:CDS:6.2 | 83 | Chr1: 22346257-22346339 | Arabidopsis thaliana |
AT1G60670:CDS:7.1 | 62 | Chr1: 22346540-22346601 | Arabidopsis thaliana |
AT1G60670:CDS:10.1 | 97 | Chr1: 22346717-22346813 | Arabidopsis thaliana |
AT1G60670:CDS:12.1 | 57 | Chr1: 22347084-22347140 | Arabidopsis thaliana |
AT1G60670:CDS:1.3 | 203 | Chr1: 22344099-22344301 | Arabidopsis thaliana |
AT1G60670:CDS:2.3 | 100 | Chr1: 22344635-22344734 | Arabidopsis thaliana |
AT1G60670:CDS:4.2 | 57 | Chr1: 22345599-22345655 | Arabidopsis thaliana |
AT1G60670:CDS:5.3 | 106 | Chr1: 22345818-22345923 | Arabidopsis thaliana |
AT1G60670:CDS:6.3 | 83 | Chr1: 22346257-22346339 | Arabidopsis thaliana |
AT1G60670:CDS:7.2 | 62 | Chr1: 22346540-22346601 | Arabidopsis thaliana |
AT1G60670:CDS:11 | 154 | Chr1: 22346717-22346870 | Arabidopsis thaliana |
AT1G60670:CDS:1.4 | 203 | Chr1: 22344099-22344301 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60670:exon:1 | 356 | Chr1: 22343585-22343940 | Arabidopsis thaliana |
AT1G60670:exon:17 | 541 | Chr1: 22347084-22347624 | Arabidopsis thaliana |
AT1G60670:exon:12 | 96 | Chr1: 22346540-22346635 | Arabidopsis thaliana |
AT1G60670:exon:2 | 325 | Chr1: 22343616-22343940 | Arabidopsis thaliana |
AT1G60670:exon:7 | 42 | Chr1: 22345599-22345640 | Arabidopsis thaliana |
AT1G60670:exon:15 | 57 | Chr1: 22347084-22347140 | Arabidopsis thaliana |
AT1G60670:exon:3 | 298 | Chr1: 22343643-22343940 | Arabidopsis thaliana |
AT1G60670:exon:11 | 62 | Chr1: 22346540-22346601 | Arabidopsis thaliana |
AT1G60670:exon:14 | 154 | Chr1: 22346717-22346870 | Arabidopsis thaliana |
AT1G60670:exon:4 | 286 | Chr1: 22343655-22343940 | Arabidopsis thaliana |
AT1G60670:exon:5 | 237 | Chr1: 22344065-22344301 | Arabidopsis thaliana |
AT1G60670:exon:6 | 100 | Chr1: 22344635-22344734 | Arabidopsis thaliana |
AT1G60670:exon:8 | 57 | Chr1: 22345599-22345655 | Arabidopsis thaliana |
AT1G60670:exon:9 | 106 | Chr1: 22345818-22345923 | Arabidopsis thaliana |
AT1G60670:exon:10 | 83 | Chr1: 22346257-22346339 | Arabidopsis thaliana |
AT1G60670:exon:13 | 97 | Chr1: 22346717-22346813 | Arabidopsis thaliana |
AT1G60670:exon:16 | 525 | Chr1: 22347084-22347608 | Arabidopsis thaliana |
AT1G08333:exon:1 | 228 | Chr1: 22346819-22347046 | Arabidopsis thaliana |
AT1G60680:exon:7 | 541 | Chr1: 22347622-22348162 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60670:five_prime_UTR:1 | 356 | Chr1: 22343585-22343940 | Arabidopsis thaliana |
AT1G60670:five_prime_UTR:2 | 325 | Chr1: 22343616-22343940 | Arabidopsis thaliana |
AT1G60670:five_prime_UTR:3 | 298 | Chr1: 22343643-22343940 | Arabidopsis thaliana |
AT1G60670:five_prime_UTR:4 | 286 | Chr1: 22343655-22343940 | Arabidopsis thaliana |
AT1G60670:five_prime_UTR:5 | 34 | Chr1: 22344065-22344098 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G08333 | AT1G08333 | 228 | Chr1: 22346819-22347046 | A. thaliana | Natural antisense transcript overlaps with AT1G60670;(source:Araport11) | NULL | ||||
AT1G60680 | locus:2036591 | AT1G60680 | 1696 | Chr1: 22347622-22349317 | A. thaliana | NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) | NULL | NAD(P)-linked oxidoreductase superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G60670.2 | 1639 | Chr1: 22343585-22347624 |
AT1G60670.4 | 1004 | Chr1: 22343616-22346635 |
AT1G60670.3 | 1109 | Chr1: 22343616-22347140 |
AT1G60670.5 | 1097 | Chr1: 22343643-22346870 |
AT1G60670.1 | 1491 | Chr1: 22343655-22347608 |
AT1G60680.1 | 1324 | Chr1: 22347622-22349317 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60670:three_prime_UTR:3 | 484 | Chr1: 22347141-22347624 | Arabidopsis thaliana |
AT1G60670:three_prime_UTR:1 | 40 | Chr1: 22346774-22346813 | Arabidopsis thaliana |
AT1G60670:three_prime_UTR:2 | 525 | Chr1: 22347084-22347608 | Arabidopsis thaliana |
AT1G60680:three_prime_UTR:1 | 202 | Chr1: 22347622-22347823 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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