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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60640:CDS:12 | 78 | Chr1: 22337534-22337611 | Arabidopsis thaliana |
AT1G60640:CDS:11 | 66 | Chr1: 22337701-22337766 | Arabidopsis thaliana |
AT1G60640:CDS:5 | 60 | Chr1: 22338467-22338526 | Arabidopsis thaliana |
AT1G60640:CDS:4 | 66 | Chr1: 22338618-22338683 | Arabidopsis thaliana |
AT1G60640:CDS:3 | 87 | Chr1: 22338767-22338853 | Arabidopsis thaliana |
AT1G60640:CDS:2 | 236 | Chr1: 22339003-22339238 | Arabidopsis thaliana |
AT1G60640:CDS:1 | 178 | Chr1: 22339336-22339513 | Arabidopsis thaliana |
AT1G60640:CDS:12.1 | 78 | Chr1: 22337534-22337611 | Arabidopsis thaliana |
AT1G60640:CDS:11.1 | 66 | Chr1: 22337701-22337766 | Arabidopsis thaliana |
AT1G60640:CDS:10 | 60 | Chr1: 22337858-22337917 | Arabidopsis thaliana |
AT1G60640:CDS:9 | 66 | Chr1: 22338009-22338074 | Arabidopsis thaliana |
AT1G60640:CDS:8 | 60 | Chr1: 22338174-22338233 | Arabidopsis thaliana |
AT1G60640:CDS:6 | 66 | Chr1: 22338319-22338384 | Arabidopsis thaliana |
AT1G60640:CDS:5.1 | 60 | Chr1: 22338467-22338526 | Arabidopsis thaliana |
AT1G60640:CDS:4.1 | 66 | Chr1: 22338618-22338683 | Arabidopsis thaliana |
AT1G60640:CDS:3.1 | 87 | Chr1: 22338767-22338853 | Arabidopsis thaliana |
AT1G60640:CDS:2.1 | 236 | Chr1: 22339003-22339238 | Arabidopsis thaliana |
AT1G60640:CDS:1.1 | 178 | Chr1: 22339336-22339513 | Arabidopsis thaliana |
AT1G60640:CDS:12.2 | 78 | Chr1: 22337534-22337611 | Arabidopsis thaliana |
AT1G60640:CDS:11.2 | 66 | Chr1: 22337701-22337766 | Arabidopsis thaliana |
AT1G60640:CDS:10.1 | 60 | Chr1: 22337858-22337917 | Arabidopsis thaliana |
AT1G60640:CDS:9.1 | 66 | Chr1: 22338009-22338074 | Arabidopsis thaliana |
AT1G60640:CDS:8.1 | 60 | Chr1: 22338174-22338233 | Arabidopsis thaliana |
AT1G60640:CDS:4.2 | 66 | Chr1: 22338618-22338683 | Arabidopsis thaliana |
AT1G60640:CDS:3.2 | 87 | Chr1: 22338767-22338853 | Arabidopsis thaliana |
AT1G60640:CDS:2.2 | 236 | Chr1: 22339003-22339238 | Arabidopsis thaliana |
AT1G60640:CDS:1.2 | 178 | Chr1: 22339336-22339513 | Arabidopsis thaliana |
AT1G60640:CDS:12.3 | 78 | Chr1: 22337534-22337611 | Arabidopsis thaliana |
AT1G60640:CDS:11.3 | 66 | Chr1: 22337701-22337766 | Arabidopsis thaliana |
AT1G60640:CDS:5.2 | 60 | Chr1: 22338467-22338526 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60640:exon:21 | 359 | Chr1: 22337253-22337611 | Arabidopsis thaliana |
AT1G60640:exon:2 | 55 | Chr1: 22339637-22339691 | Arabidopsis thaliana |
AT1G60640:exon:20 | 299 | Chr1: 22337313-22337611 | Arabidopsis thaliana |
AT1G60640:exon:5 | 304 | Chr1: 22339336-22339639 | Arabidopsis thaliana |
AT1G60640:exon:19 | 275 | Chr1: 22337337-22337611 | Arabidopsis thaliana |
AT1G60640:exon:18 | 270 | Chr1: 22337342-22337611 | Arabidopsis thaliana |
AT1G60640:exon:4 | 401 | Chr1: 22339336-22339736 | Arabidopsis thaliana |
AT1G60640:exon:12 | 63 | Chr1: 22338319-22338381 | Arabidopsis thaliana |
AT1G60640:exon:3 | 36 | Chr1: 22339637-22339672 | Arabidopsis thaliana |
AT1G60640:exon:17 | 237 | Chr1: 22337375-22337611 | Arabidopsis thaliana |
AT1G60640:exon:16 | 66 | Chr1: 22337701-22337766 | Arabidopsis thaliana |
AT1G60640:exon:15 | 60 | Chr1: 22337858-22337917 | Arabidopsis thaliana |
AT1G60640:exon:14 | 66 | Chr1: 22338009-22338074 | Arabidopsis thaliana |
AT1G60640:exon:13 | 60 | Chr1: 22338174-22338233 | Arabidopsis thaliana |
AT1G60640:exon:11 | 66 | Chr1: 22338319-22338384 | Arabidopsis thaliana |
AT1G60640:exon:10 | 60 | Chr1: 22338467-22338526 | Arabidopsis thaliana |
AT1G60640:exon:9 | 66 | Chr1: 22338618-22338683 | Arabidopsis thaliana |
AT1G60640:exon:8 | 87 | Chr1: 22338767-22338853 | Arabidopsis thaliana |
AT1G60640:exon:7 | 236 | Chr1: 22339003-22339238 | Arabidopsis thaliana |
AT1G60640:exon:6 | 196 | Chr1: 22339336-22339531 | Arabidopsis thaliana |
AT1G60640:exon:1 | 100 | Chr1: 22339637-22339736 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60640:five_prime_UTR:2 | 55 | Chr1: 22339637-22339691 | Arabidopsis thaliana |
AT1G60640:five_prime_UTR:5 | 126 | Chr1: 22339514-22339639 | Arabidopsis thaliana |
AT1G60640:five_prime_UTR:4 | 223 | Chr1: 22339514-22339736 | Arabidopsis thaliana |
AT1G60640:five_prime_UTR:3 | 36 | Chr1: 22339637-22339672 | Arabidopsis thaliana |
AT1G60640:five_prime_UTR:6 | 18 | Chr1: 22339514-22339531 | Arabidopsis thaliana |
AT1G60640:five_prime_UTR:1 | 100 | Chr1: 22339637-22339736 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G60640.6 | 1125 | Chr1: 22337253-22339691 |
AT1G60640.2 | 1370 | Chr1: 22337313-22339639 |
AT1G60640.4 | 1148 | Chr1: 22337337-22339672 |
AT1G60640.7 | 1186 | Chr1: 22337342-22339736 |
AT1G60640.3 | 1233 | Chr1: 22337375-22339672 |
AT1G60640.5 | 1110 | Chr1: 22337375-22339672 |
AT1G60640.1 | 1300 | Chr1: 22337375-22339736 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G60640:three_prime_UTR:5 | 281 | Chr1: 22337253-22337533 | Arabidopsis thaliana |
AT1G60640:three_prime_UTR:4 | 221 | Chr1: 22337313-22337533 | Arabidopsis thaliana |
AT1G60640:three_prime_UTR:3 | 197 | Chr1: 22337337-22337533 | Arabidopsis thaliana |
AT1G60640:three_prime_UTR:2 | 192 | Chr1: 22337342-22337533 | Arabidopsis thaliana |
AT1G60640:three_prime_UTR:1 | 159 | Chr1: 22337375-22337533 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...