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Gene : ZCF61 A. thaliana

DB identifier  ? AT1G59560 Secondary Identifier  ? locus:2202882
Brief Description  E3 Ubiquitin ligase family protein
TAIR Computational Description  E3 Ubiquitin ligase family protein;(source:Araport11)
TAIR Curator Summary  Encodes a chloroplast-localized putative RING-type ubiquitin E3 ligase.
TAIR Short Description  E3 Ubiquitin ligase family protein
TAIR Aliases  DAL2, SPL1, ZCF61

2 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2273  
Location: Chr1:21881534-21883806

Gene models - ZCF61 AT1G59560

? Gene models

Transcripts: 4  Exons: 39  Introns: 35 

Overlapping Features

? Genome features that overlap coordinates of this Gene

20 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SPL1P_ARATH function Possesses E3 ubiquitin-protein ligase activity.
SPL1P_ARATH pathway Protein modification; protein ubiquitination.

4 Proteins

Function

Gene Ontology

cellular component
chloroplast envelope  ? ECO  
chloroplast outer membrane  ? ECO  
chloroplast  ? ECO  
molecular function
ubiquitin-protein transferase activity  ? ECO  
metal ion binding  ? ECO  
biological process
protein ubiquitination  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets