External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 67, Exons: 21, Five Prime UTRs: 3, mRNAs: 6, Three Prime UTRs: 6, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G59520:CDS:1 | 32 | Chr1: 21861589-21861620 | Arabidopsis thaliana |
AT1G59520:CDS:2 | 190 | Chr1: 21861836-21862025 | Arabidopsis thaliana |
AT1G59520:CDS:3 | 75 | Chr1: 21862124-21862198 | Arabidopsis thaliana |
AT1G59520:CDS:4 | 107 | Chr1: 21862575-21862681 | Arabidopsis thaliana |
AT1G59520:CDS:5 | 61 | Chr1: 21863016-21863076 | Arabidopsis thaliana |
AT1G59520:CDS:6 | 60 | Chr1: 21863392-21863451 | Arabidopsis thaliana |
AT1G59520:CDS:8 | 75 | Chr1: 21863531-21863605 | Arabidopsis thaliana |
AT1G59520:CDS:10 | 135 | Chr1: 21864146-21864280 | Arabidopsis thaliana |
AT1G59520:CDS:11 | 55 | Chr1: 21864622-21864676 | Arabidopsis thaliana |
AT1G59520:CDS:12 | 123 | Chr1: 21865249-21865371 | Arabidopsis thaliana |
AT1G59520:CDS:15 | 278 | Chr1: 21865663-21865940 | Arabidopsis thaliana |
AT1G59520:CDS:1.1 | 32 | Chr1: 21861589-21861620 | Arabidopsis thaliana |
AT1G59520:CDS:2.1 | 190 | Chr1: 21861836-21862025 | Arabidopsis thaliana |
AT1G59520:CDS:3.1 | 75 | Chr1: 21862124-21862198 | Arabidopsis thaliana |
AT1G59520:CDS:4.1 | 107 | Chr1: 21862575-21862681 | Arabidopsis thaliana |
AT1G59520:CDS:5.1 | 61 | Chr1: 21863016-21863076 | Arabidopsis thaliana |
AT1G59520:CDS:6.1 | 60 | Chr1: 21863392-21863451 | Arabidopsis thaliana |
AT1G59520:CDS:8.1 | 75 | Chr1: 21863531-21863605 | Arabidopsis thaliana |
AT1G59520:CDS:10.1 | 135 | Chr1: 21864146-21864280 | Arabidopsis thaliana |
AT1G59520:CDS:11.1 | 55 | Chr1: 21864622-21864676 | Arabidopsis thaliana |
AT1G59520:CDS:12.1 | 123 | Chr1: 21865249-21865371 | Arabidopsis thaliana |
AT1G59520:CDS:16 | 122 | Chr1: 21865768-21865889 | Arabidopsis thaliana |
AT1G59520:CDS:17 | 27 | Chr1: 21865990-21866016 | Arabidopsis thaliana |
AT1G59520:CDS:1.2 | 32 | Chr1: 21861589-21861620 | Arabidopsis thaliana |
AT1G59520:CDS:2.2 | 190 | Chr1: 21861836-21862025 | Arabidopsis thaliana |
AT1G59520:CDS:3.2 | 75 | Chr1: 21862124-21862198 | Arabidopsis thaliana |
AT1G59520:CDS:4.2 | 107 | Chr1: 21862575-21862681 | Arabidopsis thaliana |
AT1G59520:CDS:5.2 | 61 | Chr1: 21863016-21863076 | Arabidopsis thaliana |
AT1G59520:CDS:6.2 | 60 | Chr1: 21863392-21863451 | Arabidopsis thaliana |
AT1G59520:CDS:8.2 | 75 | Chr1: 21863531-21863605 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G59520:exon:18 | 548 | Chr1: 21865663-21866210 | Arabidopsis thaliana |
AT1G59520:exon:19 | 122 | Chr1: 21865768-21865889 | Arabidopsis thaliana |
AT1G59520:exon:15 | 641 | Chr1: 21865249-21865889 | Arabidopsis thaliana |
AT1G59520:exon:1 | 339 | Chr1: 21861282-21861620 | Arabidopsis thaliana |
AT1G59520:exon:21 | 221 | Chr1: 21865990-21866210 | Arabidopsis thaliana |
AT1G59520:exon:2 | 324 | Chr1: 21861297-21861620 | Arabidopsis thaliana |
AT1G59520:exon:8 | 60 | Chr1: 21863392-21863451 | Arabidopsis thaliana |
AT1G59520:exon:10 | 75 | Chr1: 21863531-21863605 | Arabidopsis thaliana |
AT1G59520:exon:16 | 953 | Chr1: 21865249-21866201 | Arabidopsis thaliana |
AT1G59520:exon:3 | 237 | Chr1: 21861384-21861620 | Arabidopsis thaliana |
AT1G59520:exon:4 | 190 | Chr1: 21861836-21862025 | Arabidopsis thaliana |
AT1G59520:exon:5 | 75 | Chr1: 21862124-21862198 | Arabidopsis thaliana |
AT1G59520:exon:6 | 107 | Chr1: 21862575-21862681 | Arabidopsis thaliana |
AT1G59520:exon:7 | 61 | Chr1: 21863016-21863076 | Arabidopsis thaliana |
AT1G59520:exon:9 | 64 | Chr1: 21863392-21863455 | Arabidopsis thaliana |
AT1G59520:exon:11 | 71 | Chr1: 21863535-21863605 | Arabidopsis thaliana |
AT1G59520:exon:12 | 135 | Chr1: 21864146-21864280 | Arabidopsis thaliana |
AT1G59520:exon:13 | 55 | Chr1: 21864622-21864676 | Arabidopsis thaliana |
AT1G59520:exon:14 | 123 | Chr1: 21865249-21865371 | Arabidopsis thaliana |
AT1G59520:exon:17 | 227 | Chr1: 21865663-21865889 | Arabidopsis thaliana |
AT1G59520:exon:20 | 201 | Chr1: 21865990-21866190 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G59520:five_prime_UTR:1 | 307 | Chr1: 21861282-21861588 | Arabidopsis thaliana |
AT1G59520:five_prime_UTR:2 | 292 | Chr1: 21861297-21861588 | Arabidopsis thaliana |
AT1G59520:five_prime_UTR:3 | 205 | Chr1: 21861384-21861588 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G59520.4 | 1768 | Chr1: 21861282-21866210 |
AT1G59520.5 | 1563 | Chr1: 21861282-21866210 |
AT1G59520.2 | 1959 | Chr1: 21861282-21866210 |
AT1G59520.1 | 1668 | Chr1: 21861282-21866210 |
AT1G59520.6 | 2035 | Chr1: 21861297-21866201 |
AT1G59520.3 | 1546 | Chr1: 21861384-21866190 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G59520:three_prime_UTR:3 | 270 | Chr1: 21865941-21866210 | Arabidopsis thaliana |
AT1G59520:three_prime_UTR:1 | 471 | Chr1: 21865419-21865889 | Arabidopsis thaliana |
AT1G59520:three_prime_UTR:4 | 221 | Chr1: 21865990-21866210 | Arabidopsis thaliana |
AT1G59520:three_prime_UTR:6 | 194 | Chr1: 21866017-21866210 | Arabidopsis thaliana |
AT1G59520:three_prime_UTR:2 | 783 | Chr1: 21865419-21866201 | Arabidopsis thaliana |
AT1G59520:three_prime_UTR:5 | 174 | Chr1: 21866017-21866190 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE72135 | 356 | Chr1: 21862880-21863235 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE72135:transposon_fragment:1 | 356 | Chr1: 21862880-21863235 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...