help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : ZF14 A. thaliana

DB identifier  ? AT1G58340 Secondary Identifier  ? locus:2016615
Brief Description  MATE efflux family protein
TAIR Computational Description  MATE efflux family protein;(source:Araport11)
TAIR Curator Summary  Encodes a plant MATE (multidrug and toxic compound extrusion) transporter that is localized to the Golgi complex and small organelles and is involved in determining the rate of organ initiation. It is also involved in iron homeostasis when plants are under osmotic stress.
TAIR Short Description  MATE efflux family protein
TAIR Aliases  ABS4, BCD1, ZF14, ZRZ

2 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2452  
Location: Chr1:21652988-21655439

Gene models - ZF14 AT1G58340

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
DTX48_ARATH function Functions as a multidrug and toxin extrusion transporter. Contributes to iron homeostasis during stress responses and senescence (PubMed:22150160). Could be involved in specifying the lateral organ initiation rate (PubMed:21257605). May act as a negative regulator of hypocotyl cell elongation in the light (PubMed:26160579).
DTX48_ARATH similarity Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
DTX48_ARATH tissue specificity Highly expressed in shoot apices relative to leaves (PubMed:21257605). At vegetative stages, highly expressed at the stipules. At reproductive stages, most highly expressed in the mature pollen. Also expressed in the tips of sepals (PubMed:26160579).

1 Proteins

Function

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets