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Gene : PGN A. thaliana

DB identifier  ? AT1G56570 Secondary Identifier  ? locus:2027589
Name  ? PENTATRICOPEPTIDE REPEAT PROTEIN FOR GERMINATION ON NaCl Brief Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Computational Description  Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a mitochondria-localized E+-type pentatricopeptide repeat protein involved in C to U editing in mitochondria and chloroplasts. Functions in defense against necrotrophic fungi and abiotic stress tolerance.
TAIR Short Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Aliases  PGN

1 Gene Rifs

1 Organism

4 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3487  
Location: Chr1:21195644-21199130

Gene models - PGN AT1G56570

? Gene models

Transcripts: 2  Exons: 5  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PPR83_ARATH similarity Belongs to the PPR family. PCMP-E subfamily.

1 Proteins

Function

Gene Ontology

cellular component
mitochondrion  ? ECO  
molecular function
RNA binding  ? ECO  
biological process
response to salt stress  ? ECO  
response to abscisic acid  ? ECO  
response to glucose  ? ECO  
RNA modification  ? ECO  
defense response to fungus  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets