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Gene : AT1G56180 A. thaliana

DB identifier  ? AT1G56180 Secondary Identifier  ? locus:2011861
Brief Description  ATP-dependent zinc metalloprotease
TAIR Computational Description  ATP-dependent zinc metalloprotease;(source:Araport11)
TAIR Curator Summary  VIR3 encodes a putative chloroplast metalloprotease that is localized to the thylakoid membrane. The vir3-1 mutant came out of a genetic suppressor screen of the Arabidopsis variegation mutant yellow variegated (var2). The suppressor displayed an additional virescent phenotype, i.e. the bases of young leaves were yellow, and leaf color gradually turned to green toward the leaf tips.
TAIR Short Description  NULL
TAIR Aliases  VIR3

1 Gene Rifs

1 Organism

4 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3581  
Location: Chr1:21024486-21028066 reverse strand

Gene models - AT1G56180 AT1G56180

? Gene models

Transcripts: 2  Exons: 14  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

2 Proteins

Function

Gene Ontology

cellular component
thylakoid membrane  ? ECO  
chloroplast  ? ECO  
molecular function
ATP binding  ? ECO  
ATP-dependent peptidase activity  ? ECO  
metalloendopeptidase activity  ? ECO  
biological process
proteolysis  ? ECO  
leaf development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets