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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56145:CDS:26 | 336 | Chr1: 21008225-21008560 | Arabidopsis thaliana |
AT1G56145:CDS:25 | 151 | Chr1: 21008633-21008783 | Arabidopsis thaliana |
AT1G56145:CDS:24 | 232 | Chr1: 21008864-21009095 | Arabidopsis thaliana |
AT1G56145:CDS:22 | 211 | Chr1: 21009177-21009387 | Arabidopsis thaliana |
AT1G56145:CDS:21 | 119 | Chr1: 21009492-21009610 | Arabidopsis thaliana |
AT1G56145:CDS:20 | 159 | Chr1: 21009709-21009867 | Arabidopsis thaliana |
AT1G56145:CDS:19 | 199 | Chr1: 21009946-21010144 | Arabidopsis thaliana |
AT1G56145:CDS:18 | 377 | Chr1: 21010444-21010820 | Arabidopsis thaliana |
AT1G56145:CDS:17 | 62 | Chr1: 21010931-21010992 | Arabidopsis thaliana |
AT1G56145:CDS:16 | 45 | Chr1: 21011119-21011163 | Arabidopsis thaliana |
AT1G56145:CDS:15 | 66 | Chr1: 21011264-21011329 | Arabidopsis thaliana |
AT1G56145:CDS:14 | 66 | Chr1: 21011475-21011540 | Arabidopsis thaliana |
AT1G56145:CDS:13 | 72 | Chr1: 21011627-21011698 | Arabidopsis thaliana |
AT1G56145:CDS:12 | 72 | Chr1: 21011850-21011921 | Arabidopsis thaliana |
AT1G56145:CDS:11 | 72 | Chr1: 21012025-21012096 | Arabidopsis thaliana |
AT1G56145:CDS:10 | 72 | Chr1: 21012179-21012250 | Arabidopsis thaliana |
AT1G56145:CDS:9 | 72 | Chr1: 21012391-21012462 | Arabidopsis thaliana |
AT1G56145:CDS:8 | 72 | Chr1: 21012591-21012662 | Arabidopsis thaliana |
AT1G56145:CDS:7 | 72 | Chr1: 21012827-21012898 | Arabidopsis thaliana |
AT1G56145:CDS:6 | 72 | Chr1: 21012982-21013053 | Arabidopsis thaliana |
AT1G56145:CDS:5 | 72 | Chr1: 21013139-21013210 | Arabidopsis thaliana |
AT1G56145:CDS:3 | 72 | Chr1: 21013292-21013363 | Arabidopsis thaliana |
AT1G56145:CDS:2 | 187 | Chr1: 21013438-21013624 | Arabidopsis thaliana |
AT1G56145:CDS:1 | 109 | Chr1: 21013826-21013934 | Arabidopsis thaliana |
AT1G56145:CDS:26.1 | 336 | Chr1: 21008225-21008560 | Arabidopsis thaliana |
AT1G56145:CDS:25.1 | 151 | Chr1: 21008633-21008783 | Arabidopsis thaliana |
AT1G56145:CDS:24.1 | 232 | Chr1: 21008864-21009095 | Arabidopsis thaliana |
AT1G56145:CDS:22.1 | 211 | Chr1: 21009177-21009387 | Arabidopsis thaliana |
AT1G56145:CDS:21.1 | 119 | Chr1: 21009492-21009610 | Arabidopsis thaliana |
AT1G56145:CDS:20.1 | 159 | Chr1: 21009709-21009867 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56145:exon:29 | 504 | Chr1: 21008057-21008560 | Arabidopsis thaliana |
AT1G56145:exon:1 | 270 | Chr1: 21013826-21014095 | Arabidopsis thaliana |
AT1G56145:exon:28 | 502 | Chr1: 21008059-21008560 | Arabidopsis thaliana |
AT1G56145:exon:25 | 232 | Chr1: 21008864-21009095 | Arabidopsis thaliana |
AT1G56145:exon:23 | 211 | Chr1: 21009177-21009387 | Arabidopsis thaliana |
AT1G56145:exon:3 | 329 | Chr1: 21013438-21013766 | Arabidopsis thaliana |
AT1G56145:exon:27 | 412 | Chr1: 21008149-21008560 | Arabidopsis thaliana |
AT1G56145:exon:26 | 151 | Chr1: 21008633-21008783 | Arabidopsis thaliana |
AT1G56145:exon:24 | 524 | Chr1: 21008864-21009387 | Arabidopsis thaliana |
AT1G56145:exon:22 | 119 | Chr1: 21009492-21009610 | Arabidopsis thaliana |
AT1G56145:exon:21 | 159 | Chr1: 21009709-21009867 | Arabidopsis thaliana |
AT1G56145:exon:20 | 199 | Chr1: 21009946-21010144 | Arabidopsis thaliana |
AT1G56145:exon:19 | 377 | Chr1: 21010444-21010820 | Arabidopsis thaliana |
AT1G56145:exon:18 | 62 | Chr1: 21010931-21010992 | Arabidopsis thaliana |
AT1G56145:exon:17 | 45 | Chr1: 21011119-21011163 | Arabidopsis thaliana |
AT1G56145:exon:16 | 66 | Chr1: 21011264-21011329 | Arabidopsis thaliana |
AT1G56145:exon:15 | 66 | Chr1: 21011475-21011540 | Arabidopsis thaliana |
AT1G56145:exon:14 | 72 | Chr1: 21011627-21011698 | Arabidopsis thaliana |
AT1G56145:exon:13 | 72 | Chr1: 21011850-21011921 | Arabidopsis thaliana |
AT1G56145:exon:12 | 72 | Chr1: 21012025-21012096 | Arabidopsis thaliana |
AT1G56145:exon:11 | 72 | Chr1: 21012179-21012250 | Arabidopsis thaliana |
AT1G56145:exon:10 | 72 | Chr1: 21012391-21012462 | Arabidopsis thaliana |
AT1G56145:exon:9 | 72 | Chr1: 21012591-21012662 | Arabidopsis thaliana |
AT1G56145:exon:8 | 72 | Chr1: 21012827-21012898 | Arabidopsis thaliana |
AT1G56145:exon:7 | 72 | Chr1: 21012982-21013053 | Arabidopsis thaliana |
AT1G56145:exon:6 | 72 | Chr1: 21013139-21013210 | Arabidopsis thaliana |
AT1G56145:exon:5 | 72 | Chr1: 21013292-21013363 | Arabidopsis thaliana |
AT1G56145:exon:4 | 187 | Chr1: 21013438-21013624 | Arabidopsis thaliana |
AT1G56145:exon:2 | 193 | Chr1: 21013826-21014018 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56145:five_prime_UTR:1 | 161 | Chr1: 21013935-21014095 | Arabidopsis thaliana |
AT1G56145:five_prime_UTR:4 | 13 | Chr1: 21013351-21013363 | Arabidopsis thaliana |
AT1G56145:five_prime_UTR:3 | 329 | Chr1: 21013438-21013766 | Arabidopsis thaliana |
AT1G56145:five_prime_UTR:2 | 84 | Chr1: 21013935-21014018 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G56145.1 | 3368 | Chr1: 21008057-21014095 |
AT1G56145.3 | 3238 | Chr1: 21008059-21013766 |
AT1G56145.2 | 3280 | Chr1: 21008149-21014018 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56145:three_prime_UTR:3 | 168 | Chr1: 21008057-21008224 | Arabidopsis thaliana |
AT1G56145:three_prime_UTR:2 | 166 | Chr1: 21008059-21008224 | Arabidopsis thaliana |
AT1G56145:three_prime_UTR:1 | 76 | Chr1: 21008149-21008224 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
plasmodesma | ECO |
plasma membrane | ECO |
nucleus | ECO |
molecular function | |
ATP binding | ECO |
histone H2AS1 kinase activity | ECO |
biological process | |
protein phosphorylation | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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