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Gene : AT1G54200 A. thaliana

DB identifier  ? AT1G54200 Secondary Identifier  ? locus:2020153
Brief Description  DNA mismatch repair Msh6-like protein
TAIR Computational Description  DNA mismatch repair Msh6-like protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  NULL
TAIR Aliases  BG3

0 Gene Rifs

1 Organism

3 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1894  
Location: Chr1:20235465-20237358

Gene models - AT1G54200 AT1G54200

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BIG1B_ARATH function Involved in auxin transport. Regulator of the auxin signaling pathway.
BIG1B_ARATH similarity Belongs to the BIG GRAIN 1 (BG1) plant protein family.

1 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
molecular function
No terms in this category.
biological process
positive regulation of auxin mediated signaling pathway  ? ECO  
auxin transport  ? ECO  
auxin-activated signaling pathway  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets