External Links
- Aracyc
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- Plant Proteome Database
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- GeneVisible
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- EnsemblPlants
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
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- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52470:CDS:1 | 13 | Chr1: 19553347-19553359 | Arabidopsis thaliana |
AT1G52470:CDS:2 | 115 | Chr1: 19553771-19553885 | Arabidopsis thaliana |
AT1G52470:CDS:3 | 37 | Chr1: 19554105-19554141 | Arabidopsis thaliana |
AT1G52470:CDS:4 | 40 | Chr1: 19554213-19554252 | Arabidopsis thaliana |
AT1G52470:CDS:5 | 99 | Chr1: 19554353-19554451 | Arabidopsis thaliana |
AT1G52470:CDS:6 | 133 | Chr1: 19554687-19554819 | Arabidopsis thaliana |
AT1G52470:CDS:7 | 83 | Chr1: 19554909-19554991 | Arabidopsis thaliana |
AT1G52470:CDS:10 | 26 | Chr1: 19555073-19555098 | Arabidopsis thaliana |
AT1G52470:CDS:1.1 | 13 | Chr1: 19553347-19553359 | Arabidopsis thaliana |
AT1G52470:CDS:2.1 | 115 | Chr1: 19553771-19553885 | Arabidopsis thaliana |
AT1G52470:CDS:3.1 | 37 | Chr1: 19554105-19554141 | Arabidopsis thaliana |
AT1G52470:CDS:4.1 | 40 | Chr1: 19554213-19554252 | Arabidopsis thaliana |
AT1G52470:CDS:5.1 | 99 | Chr1: 19554353-19554451 | Arabidopsis thaliana |
AT1G52470:CDS:6.1 | 133 | Chr1: 19554687-19554819 | Arabidopsis thaliana |
AT1G52470:CDS:8 | 106 | Chr1: 19554909-19555014 | Arabidopsis thaliana |
AT1G52470:CDS:1.2 | 13 | Chr1: 19553347-19553359 | Arabidopsis thaliana |
AT1G52470:CDS:2.2 | 115 | Chr1: 19553771-19553885 | Arabidopsis thaliana |
AT1G52470:CDS:3.2 | 37 | Chr1: 19554105-19554141 | Arabidopsis thaliana |
AT1G52470:CDS:4.2 | 40 | Chr1: 19554213-19554252 | Arabidopsis thaliana |
AT1G52470:CDS:5.2 | 99 | Chr1: 19554353-19554451 | Arabidopsis thaliana |
AT1G52470:CDS:6.2 | 133 | Chr1: 19554687-19554819 | Arabidopsis thaliana |
AT1G52470:CDS:7.1 | 83 | Chr1: 19554909-19554991 | Arabidopsis thaliana |
AT1G52470:CDS:9 | 94 | Chr1: 19555071-19555164 | Arabidopsis thaliana |
AT1G52470:CDS:11 | 94 | Chr1: 19555264-19555357 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52470:exon:1 | 147 | Chr1: 19553213-19553359 | Arabidopsis thaliana |
AT1G52470:exon:12 | 92 | Chr1: 19555073-19555164 | Arabidopsis thaliana |
AT1G52470:exon:2 | 146 | Chr1: 19553214-19553359 | Arabidopsis thaliana |
AT1G52470:exon:10 | 256 | Chr1: 19554909-19555164 | Arabidopsis thaliana |
AT1G52470:exon:3 | 143 | Chr1: 19553217-19553359 | Arabidopsis thaliana |
AT1G52470:exon:4 | 115 | Chr1: 19553771-19553885 | Arabidopsis thaliana |
AT1G52470:exon:5 | 37 | Chr1: 19554105-19554141 | Arabidopsis thaliana |
AT1G52470:exon:6 | 40 | Chr1: 19554213-19554252 | Arabidopsis thaliana |
AT1G52470:exon:7 | 99 | Chr1: 19554353-19554451 | Arabidopsis thaliana |
AT1G52470:exon:8 | 133 | Chr1: 19554687-19554819 | Arabidopsis thaliana |
AT1G52470:exon:9 | 83 | Chr1: 19554909-19554991 | Arabidopsis thaliana |
AT1G52470:exon:11 | 94 | Chr1: 19555071-19555164 | Arabidopsis thaliana |
AT1G52470:exon:13 | 280 | Chr1: 19555264-19555543 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52470:five_prime_UTR:1 | 134 | Chr1: 19553213-19553346 | Arabidopsis thaliana |
AT1G52470:five_prime_UTR:2 | 133 | Chr1: 19553214-19553346 | Arabidopsis thaliana |
AT1G52470:five_prime_UTR:3 | 130 | Chr1: 19553217-19553346 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G52470.2 | 1026 | Chr1: 19553213-19555543 |
AT1G52470.3 | 1106 | Chr1: 19553214-19555543 |
AT1G52470.1 | 1024 | Chr1: 19553217-19555543 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G52470:three_prime_UTR:2 | 66 | Chr1: 19555099-19555164 | Arabidopsis thaliana |
AT1G52470:three_prime_UTR:1 | 150 | Chr1: 19555015-19555164 | Arabidopsis thaliana |
AT1G52470:three_prime_UTR:3 | 280 | Chr1: 19555264-19555543 | Arabidopsis thaliana |
AT1G52470:three_prime_UTR:4 | 186 | Chr1: 19555358-19555543 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...