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Gene : TRZ3 A. thaliana

DB identifier  ? AT1G52160 Secondary Identifier  ? locus:2037430
Name  ? tRNAse Z3 Brief Description  tRNAse Z3
TAIR Computational Description  tRNAse Z3;(source:Araport11)
TAIR Curator Summary  Encodes a tRNase Z.
TAIR Short Description  tRNAse Z3
TAIR Aliases  TRZ3

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3760  
Location: Chr1:19420715-19424474 reverse strand

Gene models - TRZ3 AT1G52160

? Gene models

Transcripts: 1  Exons: 11  Introns: 10 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RNZ3_ARATH function Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity (PubMed:19411372). Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (PubMed:19411372). Can process the mitochondrial tRNA-like structures (t-elements) (PubMed:19411372). Involved in the processing of small nucleolar RNAs (snoRNAs) (PubMed:19420328).
RNZ3_ARATH similarity Belongs to the RNase Z family.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
mitochondrion  ? ECO  
molecular function
3'-tRNA processing endoribonuclease activity  ? ECO  
metal ion binding  ? ECO  
biological process
tRNA 3'-end processing  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets