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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G51730:CDS:11 | 74 | Chr1: 19186812-19186885 | Arabidopsis thaliana |
AT1G51730:CDS:10 | 82 | Chr1: 19186974-19187055 | Arabidopsis thaliana |
AT1G51730:CDS:9 | 79 | Chr1: 19187142-19187220 | Arabidopsis thaliana |
AT1G51730:CDS:8 | 92 | Chr1: 19187329-19187420 | Arabidopsis thaliana |
AT1G51730:CDS:7 | 129 | Chr1: 19187543-19187671 | Arabidopsis thaliana |
AT1G51730:CDS:6 | 58 | Chr1: 19187799-19187856 | Arabidopsis thaliana |
AT1G51730:CDS:5 | 70 | Chr1: 19187937-19188006 | Arabidopsis thaliana |
AT1G51730:CDS:4 | 34 | Chr1: 19188094-19188127 | Arabidopsis thaliana |
AT1G51730:CDS:3 | 68 | Chr1: 19188246-19188313 | Arabidopsis thaliana |
AT1G51730:CDS:2 | 66 | Chr1: 19188398-19188463 | Arabidopsis thaliana |
AT1G51730:CDS:1 | 7 | Chr1: 19188632-19188638 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G51720:exon:20 | 311 | Chr1: 19186222-19186532 | Arabidopsis thaliana |
AT1G51730:exon:11 | 398 | Chr1: 19186488-19186885 | Arabidopsis thaliana |
AT1G51730:exon:10 | 82 | Chr1: 19186974-19187055 | Arabidopsis thaliana |
AT1G51730:exon:9 | 79 | Chr1: 19187142-19187220 | Arabidopsis thaliana |
AT1G51730:exon:8 | 92 | Chr1: 19187329-19187420 | Arabidopsis thaliana |
AT1G51730:exon:7 | 129 | Chr1: 19187543-19187671 | Arabidopsis thaliana |
AT1G51730:exon:6 | 58 | Chr1: 19187799-19187856 | Arabidopsis thaliana |
AT1G51730:exon:5 | 70 | Chr1: 19187937-19188006 | Arabidopsis thaliana |
AT1G51730:exon:4 | 34 | Chr1: 19188094-19188127 | Arabidopsis thaliana |
AT1G51730:exon:3 | 68 | Chr1: 19188246-19188313 | Arabidopsis thaliana |
AT1G51730:exon:2 | 66 | Chr1: 19188398-19188463 | Arabidopsis thaliana |
AT1G51730:exon:1 | 174 | Chr1: 19188632-19188805 | Arabidopsis thaliana |
AT1G51740:exon:1 | 342 | Chr1: 19188799-19189140 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G51730:five_prime_UTR:1 | 167 | Chr1: 19188639-19188805 | Arabidopsis thaliana |
AT1G51740:five_prime_UTR:1 | 342 | Chr1: 19188799-19189140 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G51720 | locus:2017542 | AT1G51720 | 5789 | Chr1: 19180744-19186532 | A. thaliana | Amino acid dehydrogenase family protein;(source:Araport11) | NULL | Amino acid dehydrogenase family protein | ||
AT1G51740 | locus:2017632 | SYP81 | syntaxin of plants 81 | 2574 | Chr1: 19188799-19191372 | A. thaliana | syntaxin of plants 81;(source:Araport11) | member of SYP8 Gene Family; together with SYP31 controls ER-Golgi trafficking in the plant secretory pathway. | syntaxin of plants 81 | ATSYP81, ATUFE1, SYP81, UFE1 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G51720.1 | 2497 | Chr1: 19180744-19186532 |
AT1G51720.2 | 2653 | Chr1: 19180772-19186532 |
AT1G51720.3 | 2401 | Chr1: 19181031-19186532 |
AT1G51730.1 | 1250 | Chr1: 19186488-19188805 |
AT1G51740.2 | 1424 | Chr1: 19188799-19191312 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G51720:three_prime_UTR:4 | 311 | Chr1: 19186222-19186532 | Arabidopsis thaliana |
AT1G51720:three_prime_UTR:5 | 235 | Chr1: 19186298-19186532 | Arabidopsis thaliana |
AT1G51730:three_prime_UTR:1 | 324 | Chr1: 19186488-19186811 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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