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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50950:CDS:1 | 41 | Chr1: 18880465-18880505 | Arabidopsis thaliana |
AT1G50950:CDS:2 | 91 | Chr1: 18880776-18880866 | Arabidopsis thaliana |
AT1G50950:CDS:3 | 95 | Chr1: 18881011-18881105 | Arabidopsis thaliana |
AT1G50950:CDS:4 | 58 | Chr1: 18881255-18881312 | Arabidopsis thaliana |
AT1G50950:CDS:5 | 188 | Chr1: 18881560-18881747 | Arabidopsis thaliana |
AT1G50950:CDS:6 | 58 | Chr1: 18881851-18881908 | Arabidopsis thaliana |
AT1G50950:CDS:7 | 41 | Chr1: 18882250-18882290 | Arabidopsis thaliana |
AT1G50950:CDS:8 | 75 | Chr1: 18882399-18882473 | Arabidopsis thaliana |
AT1G50950:CDS:10 | 57 | Chr1: 18882577-18882633 | Arabidopsis thaliana |
AT1G50950:CDS:11 | 67 | Chr1: 18882767-18882833 | Arabidopsis thaliana |
AT1G50950:CDS:12 | 144 | Chr1: 18882973-18883116 | Arabidopsis thaliana |
AT1G50950:CDS:13 | 222 | Chr1: 18883227-18883448 | Arabidopsis thaliana |
AT1G50950:CDS:14 | 162 | Chr1: 18883523-18883684 | Arabidopsis thaliana |
AT1G50950:CDS:15 | 78 | Chr1: 18883799-18883876 | Arabidopsis thaliana |
AT1G50950:CDS:16 | 78 | Chr1: 18883966-18884043 | Arabidopsis thaliana |
AT1G50950:CDS:1.1 | 41 | Chr1: 18880465-18880505 | Arabidopsis thaliana |
AT1G50950:CDS:2.1 | 91 | Chr1: 18880776-18880866 | Arabidopsis thaliana |
AT1G50950:CDS:3.1 | 95 | Chr1: 18881011-18881105 | Arabidopsis thaliana |
AT1G50950:CDS:4.1 | 58 | Chr1: 18881255-18881312 | Arabidopsis thaliana |
AT1G50950:CDS:5.1 | 188 | Chr1: 18881560-18881747 | Arabidopsis thaliana |
AT1G50950:CDS:6.1 | 58 | Chr1: 18881851-18881908 | Arabidopsis thaliana |
AT1G50950:CDS:7.1 | 41 | Chr1: 18882250-18882290 | Arabidopsis thaliana |
AT1G50950:CDS:8.1 | 75 | Chr1: 18882399-18882473 | Arabidopsis thaliana |
AT1G50950:CDS:9 | 72 | Chr1: 18882562-18882633 | Arabidopsis thaliana |
AT1G50950:CDS:11.1 | 67 | Chr1: 18882767-18882833 | Arabidopsis thaliana |
AT1G50950:CDS:12.1 | 144 | Chr1: 18882973-18883116 | Arabidopsis thaliana |
AT1G50950:CDS:13.1 | 222 | Chr1: 18883227-18883448 | Arabidopsis thaliana |
AT1G50950:CDS:14.1 | 162 | Chr1: 18883523-18883684 | Arabidopsis thaliana |
AT1G50950:CDS:15.1 | 78 | Chr1: 18883799-18883876 | Arabidopsis thaliana |
AT1G50950:CDS:16.1 | 78 | Chr1: 18883966-18884043 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50950:exon:1 | 394 | Chr1: 18880112-18880505 | Arabidopsis thaliana |
AT1G50950:exon:11 | 57 | Chr1: 18882577-18882633 | Arabidopsis thaliana |
AT1G50950:exon:18 | 361 | Chr1: 18883966-18884326 | Arabidopsis thaliana |
AT1G50950:exon:2 | 334 | Chr1: 18880172-18880505 | Arabidopsis thaliana |
AT1G50950:exon:3 | 91 | Chr1: 18880776-18880866 | Arabidopsis thaliana |
AT1G50950:exon:4 | 95 | Chr1: 18881011-18881105 | Arabidopsis thaliana |
AT1G50950:exon:5 | 58 | Chr1: 18881255-18881312 | Arabidopsis thaliana |
AT1G50950:exon:6 | 188 | Chr1: 18881560-18881747 | Arabidopsis thaliana |
AT1G50950:exon:7 | 58 | Chr1: 18881851-18881908 | Arabidopsis thaliana |
AT1G50950:exon:8 | 41 | Chr1: 18882250-18882290 | Arabidopsis thaliana |
AT1G50950:exon:9 | 75 | Chr1: 18882399-18882473 | Arabidopsis thaliana |
AT1G50950:exon:10 | 72 | Chr1: 18882562-18882633 | Arabidopsis thaliana |
AT1G50950:exon:12 | 67 | Chr1: 18882767-18882833 | Arabidopsis thaliana |
AT1G50950:exon:13 | 144 | Chr1: 18882973-18883116 | Arabidopsis thaliana |
AT1G50950:exon:14 | 222 | Chr1: 18883227-18883448 | Arabidopsis thaliana |
AT1G50950:exon:15 | 162 | Chr1: 18883523-18883684 | Arabidopsis thaliana |
AT1G50950:exon:16 | 78 | Chr1: 18883799-18883876 | Arabidopsis thaliana |
AT1G50950:exon:17 | 290 | Chr1: 18883966-18884255 | Arabidopsis thaliana |
AT1G07707:exon:2 | 257 | Chr1: 18884313-18884569 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50950:five_prime_UTR:1 | 353 | Chr1: 18880112-18880464 | Arabidopsis thaliana |
AT1G50950:five_prime_UTR:2 | 293 | Chr1: 18880172-18880464 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G07707 | AT1G07707 | 497 | Chr1: 18884313-18884809 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G50950.1 | 2091 | Chr1: 18880112-18884326 |
AT1G50950.2 | 1975 | Chr1: 18880172-18884255 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50950:three_prime_UTR:2 | 283 | Chr1: 18884044-18884326 | Arabidopsis thaliana |
AT1G50950:three_prime_UTR:1 | 212 | Chr1: 18884044-18884255 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
endoplasmic reticulum | ECO |
membrane | ECO |
COPII-coated ER to Golgi transport vesicle | ECO |
molecular function | |
No terms in this category. | |
biological process | |
intracellular transport | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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