External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50120:CDS:1 | 295 | Chr1: 18562302-18562596 | Arabidopsis thaliana |
AT1G50120:CDS:2 | 78 | Chr1: 18562745-18562822 | Arabidopsis thaliana |
AT1G50120:CDS:3 | 158 | Chr1: 18562978-18563135 | Arabidopsis thaliana |
AT1G50120:CDS:4 | 76 | Chr1: 18563920-18563995 | Arabidopsis thaliana |
AT1G50120:CDS:5 | 68 | Chr1: 18564159-18564226 | Arabidopsis thaliana |
AT1G50120:CDS:6 | 250 | Chr1: 18564353-18564602 | Arabidopsis thaliana |
AT1G50120:CDS:7 | 117 | Chr1: 18564869-18564985 | Arabidopsis thaliana |
AT1G50120:CDS:8 | 107 | Chr1: 18565069-18565175 | Arabidopsis thaliana |
AT1G50120:CDS:10 | 54 | Chr1: 18565266-18565319 | Arabidopsis thaliana |
AT1G50120:CDS:11 | 84 | Chr1: 18565404-18565487 | Arabidopsis thaliana |
AT1G50120:CDS:12 | 164 | Chr1: 18565602-18565765 | Arabidopsis thaliana |
AT1G50120:CDS:13 | 148 | Chr1: 18565868-18566015 | Arabidopsis thaliana |
AT1G50120:CDS:1.1 | 295 | Chr1: 18562302-18562596 | Arabidopsis thaliana |
AT1G50120:CDS:2.1 | 78 | Chr1: 18562745-18562822 | Arabidopsis thaliana |
AT1G50120:CDS:3.1 | 158 | Chr1: 18562978-18563135 | Arabidopsis thaliana |
AT1G50120:CDS:4.1 | 76 | Chr1: 18563920-18563995 | Arabidopsis thaliana |
AT1G50120:CDS:5.1 | 68 | Chr1: 18564159-18564226 | Arabidopsis thaliana |
AT1G50120:CDS:6.1 | 250 | Chr1: 18564353-18564602 | Arabidopsis thaliana |
AT1G50120:CDS:7.1 | 117 | Chr1: 18564869-18564985 | Arabidopsis thaliana |
AT1G50120:CDS:9 | 251 | Chr1: 18565069-18565319 | Arabidopsis thaliana |
AT1G50120:CDS:11.1 | 84 | Chr1: 18565404-18565487 | Arabidopsis thaliana |
AT1G50120:CDS:12.1 | 164 | Chr1: 18565602-18565765 | Arabidopsis thaliana |
AT1G50120:CDS:13.1 | 148 | Chr1: 18565868-18566015 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50120:exon:1 | 869 | Chr1: 18561728-18562596 | Arabidopsis thaliana |
AT1G50120:exon:9 | 107 | Chr1: 18565069-18565175 | Arabidopsis thaliana |
AT1G50120:exon:11 | 54 | Chr1: 18565266-18565319 | Arabidopsis thaliana |
AT1G50120:exon:14 | 390 | Chr1: 18565868-18566257 | Arabidopsis thaliana |
AT1G50120:exon:2 | 807 | Chr1: 18561790-18562596 | Arabidopsis thaliana |
AT1G50120:exon:3 | 78 | Chr1: 18562745-18562822 | Arabidopsis thaliana |
AT1G50120:exon:4 | 158 | Chr1: 18562978-18563135 | Arabidopsis thaliana |
AT1G50120:exon:5 | 76 | Chr1: 18563920-18563995 | Arabidopsis thaliana |
AT1G50120:exon:6 | 68 | Chr1: 18564159-18564226 | Arabidopsis thaliana |
AT1G50120:exon:7 | 250 | Chr1: 18564353-18564602 | Arabidopsis thaliana |
AT1G50120:exon:8 | 117 | Chr1: 18564869-18564985 | Arabidopsis thaliana |
AT1G50120:exon:10 | 251 | Chr1: 18565069-18565319 | Arabidopsis thaliana |
AT1G50120:exon:12 | 84 | Chr1: 18565404-18565487 | Arabidopsis thaliana |
AT1G50120:exon:13 | 164 | Chr1: 18565602-18565765 | Arabidopsis thaliana |
AT1G50120:exon:15 | 402 | Chr1: 18565868-18566269 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50120:five_prime_UTR:1 | 574 | Chr1: 18561728-18562301 | Arabidopsis thaliana |
AT1G50120:five_prime_UTR:2 | 512 | Chr1: 18561790-18562301 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G50120.1 | 2415 | Chr1: 18561728-18566257 |
AT1G50120.2 | 2455 | Chr1: 18561790-18566269 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G50120:three_prime_UTR:1 | 242 | Chr1: 18566016-18566257 | Arabidopsis thaliana |
AT1G50120:three_prime_UTR:2 | 254 | Chr1: 18566016-18566269 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
trans-Golgi network | ECO |
cytosol | ECO |
molecular function | |
No terms in this category. | |
biological process | |
retrograde transport, endosome to Golgi | ECO |
pollen tube growth | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...