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Gene : AT1G49250 A. thaliana

DB identifier  ? AT1G49250 Secondary Identifier  ? locus:2010207
Brief Description  ATP-dependent DNA ligase
TAIR Computational Description  ATP-dependent DNA ligase;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  ATP-dependent DNA ligase
TAIR Aliases  LIG 4

0 Gene Rifs

1 Organism

5 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3793  
Location: Chr1:18220533-18224325

Gene models - AT1G49250 AT1G49250

? Gene models

Transcripts: 1  Exons: 17  Introns: 16 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDSs: 17, Exons: 18, Gene: 1, mRNA: 1, snRNA: 1, Three Prime UTR: 1

18 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
F4I1P7_ARATH similarity Belongs to the ATP-dependent DNA ligase family.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
ATP binding  ? ECO  
DNA binding  ? ECO  
DNA ligase (ATP) activity  ? ECO  
biological process
DNA repair  ? ECO  
DNA recombination  ? ECO  
DNA replication  ? ECO  
DNA biosynthetic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets