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Gene : AT1G48550 A. thaliana

DB identifier  ? AT1G48550 Secondary Identifier  ? locus:2198075
Brief Description  Vacuolar protein sorting-associated protein 26
TAIR Computational Description  Vacuolar protein sorting-associated protein 26;(source:Araport11)
TAIR Curator Summary  VPS26C is a component of a retromer complex, it is involved in endosome to lysosome protein transport and root hair growth.
TAIR Short Description  Vacuolar protein sorting-associated protein 26
TAIR Aliases  VPS26C

1 Gene Rifs

1 Organism

3 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2175  
Location: Chr1:17950569-17952743 reverse strand

Gene models - AT1G48550 AT1G48550

? Gene models

Transcripts: 2  Exons: 22  Introns: 20 

Overlapping Features Displayer

17 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
F4HYH6_ARATH F4HYH7_ARATH similarity Belongs to the VPS26 family.

2 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
retromer complex  ? ECO  
molecular function
No terms in this category.
biological process
root hair cell tip growth  ? ECO  
retrograde transport, endosome to Golgi  ? ECO  
intracellular protein transport  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets