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Gene : EMB1075 A. thaliana

DB identifier  ? AT1G43710 Secondary Identifier  ? locus:2031133
Name  ? embryo defective 1075 Brief Description  Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
TAIR Computational Description  Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a serine decarboxylase that is involved in ethanolamine metabolism and is crucial for plant growth.
TAIR Short Description  Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
TAIR Aliases  ATSDC1, EMB1075, SDC1

1 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2233  
Location: Chr1:16486230-16488462 reverse strand

Gene models - EMB1075 AT1G43710

? Gene models

Transcripts: 1  Exons: 5  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SDC1_ARATH function Catalyzes the biosynthesis of ethanolamine from serine. Highly specific for L-serine and does not attack D-serine, L-phosphoserine, phosphatidylserine, L-histidine L-glutamate L-tyrosine or L-tryptophan. Decarboxylation of free serine is the major source of ethanolamine production in plants and ethanolamine metabolism is crucial for the synthesis of choline, phosphatidylethanolamine (PE) and phosphatidylcholine (PC), and thus for plant growth.
SDC1_ARATH similarity Belongs to the group II decarboxylase family.
SDC1_ARATH tissue specificity Expressed in roots, leaves, flowers and siliques.

1 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
plasma membrane  ? ECO  
molecular function
serine decarboxylase activity  ? ECO  
pyridoxal phosphate binding  ? ECO  
biological process
ethanolamine metabolic process  ? ECO  
carboxylic acid metabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets