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Gene : RAP2.6 A. thaliana

DB identifier  ? AT1G43160 Secondary Identifier  ? locus:2018635
Name  ? related to AP2 6 Brief Description  related to AP2 6
TAIR Computational Description  related to AP2 6;(source:Araport11)
TAIR Curator Summary  encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.
TAIR Short Description  related to AP2 6
TAIR Aliases  ERF113, RAP2.6

5 Gene Rifs

1 Organism

41 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1141  
Location: Chr1:16263805-16264945

Gene models - RAP2.6 AT1G43160

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
RAP26_ARATH function Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Binds to the GCC-box pathogenesis-related promoter element and the cis-element CE1 (coupling element 1). Involved in the regulation of gene expression in response to abiotic stresses, possibly through the abscisic acid (ABA) signaling pathway (PubMed:20193749). Involved in resistance to the beet cyst nematode Heterodera schachtii in roots. May promote callose deposition at syncytia which may interfere with nutrient import into syncytia and inhibit the development of nematodes (PubMed:23510309).
RAP26_ARATH similarity Belongs to the AP2/ERF transcription factor family. ERF subfamily.
RAP26_ARATH tissue specificity Expressed in petals, carpels and valves of immature siliques (PubMed:21069430). Expressed at high levels in stems. Expressed in roots, rosette leaves, flowers and siliques (PubMed:20193749, PubMed:23510309).

1 Proteins

Function

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets