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Gene : SHM7 A. thaliana

DB identifier  ? AT1G36370 Secondary Identifier  ? locus:2035937
Name  ? serine hydroxymethyltransferase 7 Brief Description  serine hydroxymethyltransferase 7
TAIR Computational Description  serine hydroxymethyltransferase 7;(source:Araport11)
TAIR Curator Summary  Encodes a nuclear localised protein MSA1 (MORE SULPHUR ACCUMULATION1). Epigenetically regulates sulphur homeostasis. Has sequence similarity to SHM (serine hydroxymethyltransferase) but lacks SHM activity in vitro.
TAIR Short Description  serine hydroxymethyltransferase 7
TAIR Aliases  MSA1, SHM7

1 Gene Rifs

1 Organism

19 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2698  
Location: Chr1:13696042-13698739 reverse strand

Gene models - SHM7 AT1G36370

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GLYC7_ARATH function Catalyzes the interconversion of serine and glycine.
GLYC7_ARATH pathway One-carbon metabolism; tetrahydrofolate interconversion.
GLYC7_ARATH similarity Belongs to the SHMT family.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
glycine hydroxymethyltransferase activity  ? ECO  
pyridoxal phosphate binding  ? ECO  
biological process
S-adenosylmethionine metabolic process  ? ECO  
tetrahydrofolate interconversion  ? ECO  
sulfate ion homeostasis  ? ECO  
glycine biosynthetic process from serine  ? ECO  
response to cadmium ion  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets