External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 29, Exons: 19, Five Prime UTRs: 4, mRNAs: 6, Three Prime UTRs: 4, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33790:CDS:1 | 213 | Chr1: 12256990-12257202 | Arabidopsis thaliana |
AT1G33790:CDS:3 | 426 | Chr1: 12257975-12258400 | Arabidopsis thaliana |
AT1G33790:CDS:9 | 453 | Chr1: 12259580-12260032 | Arabidopsis thaliana |
AT1G33790:CDS:12 | 246 | Chr1: 12260187-12260432 | Arabidopsis thaliana |
AT1G33790:CDS:1.1 | 213 | Chr1: 12256990-12257202 | Arabidopsis thaliana |
AT1G33790:CDS:2 | 259 | Chr1: 12257975-12258233 | Arabidopsis thaliana |
AT1G33790:CDS:8 | 167 | Chr1: 12259328-12259494 | Arabidopsis thaliana |
AT1G33790:CDS:9.1 | 453 | Chr1: 12259580-12260032 | Arabidopsis thaliana |
AT1G33790:CDS:12.1 | 246 | Chr1: 12260187-12260432 | Arabidopsis thaliana |
AT1G33790:CDS:1.2 | 213 | Chr1: 12256990-12257202 | Arabidopsis thaliana |
AT1G33790:CDS:3.1 | 426 | Chr1: 12257975-12258400 | Arabidopsis thaliana |
AT1G33790:CDS:4 | 47 | Chr1: 12258496-12258542 | Arabidopsis thaliana |
AT1G33790:CDS:10 | 406 | Chr1: 12259627-12260032 | Arabidopsis thaliana |
AT1G33790:CDS:12.2 | 246 | Chr1: 12260187-12260432 | Arabidopsis thaliana |
AT1G33790:CDS:1.3 | 213 | Chr1: 12256990-12257202 | Arabidopsis thaliana |
AT1G33790:CDS:7 | 426 | Chr1: 12259069-12259494 | Arabidopsis thaliana |
AT1G33790:CDS:9.2 | 453 | Chr1: 12259580-12260032 | Arabidopsis thaliana |
AT1G33790:CDS:12.3 | 246 | Chr1: 12260187-12260432 | Arabidopsis thaliana |
AT1G33790:CDS:1.4 | 213 | Chr1: 12256990-12257202 | Arabidopsis thaliana |
AT1G33790:CDS:3.2 | 426 | Chr1: 12257975-12258400 | Arabidopsis thaliana |
AT1G33790:CDS:6 | 474 | Chr1: 12258496-12258969 | Arabidopsis thaliana |
AT1G33790:CDS:7.1 | 426 | Chr1: 12259069-12259494 | Arabidopsis thaliana |
AT1G33790:CDS:9.3 | 453 | Chr1: 12259580-12260032 | Arabidopsis thaliana |
AT1G33790:CDS:12.4 | 246 | Chr1: 12260187-12260432 | Arabidopsis thaliana |
AT1G33790:CDS:1.5 | 213 | Chr1: 12256990-12257202 | Arabidopsis thaliana |
AT1G33790:CDS:3.3 | 426 | Chr1: 12257975-12258400 | Arabidopsis thaliana |
AT1G33790:CDS:5 | 86 | Chr1: 12258496-12258581 | Arabidopsis thaliana |
AT1G33790:CDS:11 | 367 | Chr1: 12259666-12260032 | Arabidopsis thaliana |
AT1G33790:CDS:12.5 | 246 | Chr1: 12260187-12260432 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33790:exon:1 | 289 | Chr1: 12256474-12256762 | Arabidopsis thaliana |
AT1G33790:exon:6 | 259 | Chr1: 12257975-12258233 | Arabidopsis thaliana |
AT1G33790:exon:12 | 167 | Chr1: 12259328-12259494 | Arabidopsis thaliana |
AT1G33790:exon:19 | 452 | Chr1: 12260187-12260638 | Arabidopsis thaliana |
AT1G33790:exon:2 | 270 | Chr1: 12256493-12256762 | Arabidopsis thaliana |
AT1G33790:exon:8 | 47 | Chr1: 12258496-12258542 | Arabidopsis thaliana |
AT1G33790:exon:14 | 406 | Chr1: 12259627-12260032 | Arabidopsis thaliana |
AT1G33790:exon:18 | 430 | Chr1: 12260187-12260616 | Arabidopsis thaliana |
AT1G33790:exon:16 | 389 | Chr1: 12260187-12260575 | Arabidopsis thaliana |
AT1G33790:exon:3 | 99 | Chr1: 12256664-12256762 | Arabidopsis thaliana |
AT1G33790:exon:4 | 239 | Chr1: 12256964-12257202 | Arabidopsis thaliana |
AT1G33790:exon:10 | 474 | Chr1: 12258496-12258969 | Arabidopsis thaliana |
AT1G33790:exon:11 | 426 | Chr1: 12259069-12259494 | Arabidopsis thaliana |
AT1G33790:exon:13 | 453 | Chr1: 12259580-12260032 | Arabidopsis thaliana |
AT1G33790:exon:5 | 213 | Chr1: 12256990-12257202 | Arabidopsis thaliana |
AT1G33790:exon:7 | 426 | Chr1: 12257975-12258400 | Arabidopsis thaliana |
AT1G33790:exon:9 | 86 | Chr1: 12258496-12258581 | Arabidopsis thaliana |
AT1G33790:exon:15 | 367 | Chr1: 12259666-12260032 | Arabidopsis thaliana |
AT1G33790:exon:17 | 429 | Chr1: 12260187-12260615 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33790:five_prime_UTR:1 | 289 | Chr1: 12256474-12256762 | Arabidopsis thaliana |
AT1G33790:five_prime_UTR:2 | 270 | Chr1: 12256493-12256762 | Arabidopsis thaliana |
AT1G33790:five_prime_UTR:3 | 99 | Chr1: 12256664-12256762 | Arabidopsis thaliana |
AT1G33790:five_prime_UTR:4 | 26 | Chr1: 12256964-12256989 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G33790.3 | 1859 | Chr1: 12256474-12260638 |
AT1G33790.4 | 1859 | Chr1: 12256474-12260638 |
AT1G33790.5 | 1818 | Chr1: 12256493-12260616 |
AT1G33790.1 | 1606 | Chr1: 12256664-12260575 |
AT1G33790.2 | 2546 | Chr1: 12256664-12260615 |
AT1G33790.6 | 1521 | Chr1: 12256990-12260615 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33790:three_prime_UTR:4 | 206 | Chr1: 12260433-12260638 | Arabidopsis thaliana |
AT1G33790:three_prime_UTR:3 | 184 | Chr1: 12260433-12260616 | Arabidopsis thaliana |
AT1G33790:three_prime_UTR:1 | 143 | Chr1: 12260433-12260575 | Arabidopsis thaliana |
AT1G33790:three_prime_UTR:2 | 183 | Chr1: 12260433-12260615 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE39820 | 766 | Chr1: 12257210-12257975 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE39820:transposon_fragment:1 | 766 | Chr1: 12257210-12257975 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8ASF2_ARATH JAL4_ARATH-3 A0A1P8AS93_ARATH A0A1P8AS89_ARATH JAL4_ARATH A0A1P8AS94_ARATH JAL4_ARATH-2 | similarity | Belongs to the jacalin lectin family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
carbohydrate binding | ECO |
biological process | |
No terms in this category. |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...