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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33050:CDS:7 | 147 | Chr1: 11968361-11968507 | Arabidopsis thaliana |
AT1G33050:CDS:3 | 156 | Chr1: 11968589-11968744 | Arabidopsis thaliana |
AT1G33050:CDS:2 | 1541 | Chr1: 11968971-11970511 | Arabidopsis thaliana |
AT1G33050:CDS:1 | 238 | Chr1: 11970653-11970890 | Arabidopsis thaliana |
AT1G33050:CDS:7.1 | 147 | Chr1: 11968361-11968507 | Arabidopsis thaliana |
AT1G33050:CDS:3.1 | 156 | Chr1: 11968589-11968744 | Arabidopsis thaliana |
AT1G33050:CDS:2.1 | 1541 | Chr1: 11968971-11970511 | Arabidopsis thaliana |
AT1G33050:CDS:1.1 | 238 | Chr1: 11970653-11970890 | Arabidopsis thaliana |
AT1G33050:CDS:5 | 225 | Chr1: 11968520-11968744 | Arabidopsis thaliana |
AT1G33050:CDS:2.2 | 1541 | Chr1: 11968971-11970511 | Arabidopsis thaliana |
AT1G33050:CDS:1.2 | 238 | Chr1: 11970653-11970890 | Arabidopsis thaliana |
AT1G33050:CDS:7.2 | 147 | Chr1: 11968361-11968507 | Arabidopsis thaliana |
AT1G33050:CDS:3.2 | 156 | Chr1: 11968589-11968744 | Arabidopsis thaliana |
AT1G33050:CDS:2.3 | 1541 | Chr1: 11968971-11970511 | Arabidopsis thaliana |
AT1G33050:CDS:1.3 | 238 | Chr1: 11970653-11970890 | Arabidopsis thaliana |
AT1G33050:CDS:6 | 156 | Chr1: 11968520-11968675 | Arabidopsis thaliana |
AT1G33050:CDS:2.4 | 1541 | Chr1: 11968971-11970511 | Arabidopsis thaliana |
AT1G33050:CDS:1.4 | 238 | Chr1: 11970653-11970890 | Arabidopsis thaliana |
AT1G33050:CDS:7.3 | 147 | Chr1: 11968361-11968507 | Arabidopsis thaliana |
AT1G33050:CDS:4 | 87 | Chr1: 11968589-11968675 | Arabidopsis thaliana |
AT1G33050:CDS:2.5 | 1541 | Chr1: 11968971-11970511 | Arabidopsis thaliana |
AT1G33050:CDS:1.5 | 238 | Chr1: 11970653-11970890 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33040:exon:4 | 498 | Chr1: 11967346-11967843 | Arabidopsis thaliana |
AT1G33050:exon:17 | 222 | Chr1: 11967783-11968004 | Arabidopsis thaliana |
AT1G33050:exon:3 | 420 | Chr1: 11970653-11971072 | Arabidopsis thaliana |
AT1G33050:exon:16 | 189 | Chr1: 11967816-11968004 | Arabidopsis thaliana |
AT1G33050:exon:12 | 129 | Chr1: 11968123-11968251 | Arabidopsis thaliana |
AT1G33050:exon:8 | 397 | Chr1: 11968348-11968744 | Arabidopsis thaliana |
AT1G33050:exon:2 | 424 | Chr1: 11970653-11971076 | Arabidopsis thaliana |
AT1G33050:exon:15 | 178 | Chr1: 11967827-11968004 | Arabidopsis thaliana |
AT1G33050:exon:11 | 125 | Chr1: 11968127-11968251 | Arabidopsis thaliana |
AT1G33050:exon:6 | 156 | Chr1: 11968589-11968744 | Arabidopsis thaliana |
AT1G33050:exon:14 | 392 | Chr1: 11967860-11968251 | Arabidopsis thaliana |
AT1G33050:exon:9 | 328 | Chr1: 11968348-11968675 | Arabidopsis thaliana |
AT1G33050:exon:13 | 390 | Chr1: 11967862-11968251 | Arabidopsis thaliana |
AT1G33050:exon:10 | 160 | Chr1: 11968348-11968507 | Arabidopsis thaliana |
AT1G33050:exon:7 | 87 | Chr1: 11968589-11968675 | Arabidopsis thaliana |
AT1G33050:exon:5 | 1541 | Chr1: 11968971-11970511 | Arabidopsis thaliana |
AT1G33050:exon:4 | 394 | Chr1: 11970653-11971046 | Arabidopsis thaliana |
AT1G33050:exon:1 | 123 | Chr1: 11971410-11971532 | Arabidopsis thaliana |
AT1G33055:exon:1 | 1273 | Chr1: 11971308-11972580 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33050:five_prime_UTR:3 | 182 | Chr1: 11970891-11971072 | Arabidopsis thaliana |
AT1G33050:five_prime_UTR:2 | 186 | Chr1: 11970891-11971076 | Arabidopsis thaliana |
AT1G33050:five_prime_UTR:4 | 156 | Chr1: 11970891-11971046 | Arabidopsis thaliana |
AT1G33050:five_prime_UTR:1 | 123 | Chr1: 11971410-11971532 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G33040 | locus:2206975 | NACA5 | nascent polypeptide-associated complex subunit alpha-like protein 5 | 1421 | Chr1: 11966423-11967843 | A. thaliana | nascent polypeptide-associated complex subunit alpha-like protein 5;(source:Araport11) | NULL | nascent polypeptide-associated complex subunit alpha-like protein 5 | NACA5 |
AT1G33055 | locus:505006164 | AT1G33055 | 1273 | Chr1: 11971308-11972580 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL | HUP32 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G33040.1 | 901 | Chr1: 11966423-11967843 |
AT1G33050.1 | 2624 | Chr1: 11967783-11971072 |
AT1G33050.4 | 2692 | Chr1: 11967816-11971532 |
AT1G33050.6 | 2665 | Chr1: 11967827-11971076 |
AT1G33050.5 | 2677 | Chr1: 11967827-11971532 |
AT1G33050.3 | 2778 | Chr1: 11967860-11971532 |
AT1G33050.2 | 2695 | Chr1: 11967862-11971532 |
AT1G33055.1 | 1273 | Chr1: 11971308-11972580 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G33040:three_prime_UTR:1 | 147 | Chr1: 11967697-11967843 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:9 | 222 | Chr1: 11967783-11968004 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:8 | 189 | Chr1: 11967816-11968004 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:4 | 129 | Chr1: 11968123-11968251 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:7 | 178 | Chr1: 11967827-11968004 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:3 | 125 | Chr1: 11968127-11968251 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:6 | 392 | Chr1: 11967860-11968251 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:1 | 172 | Chr1: 11968348-11968519 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:5 | 390 | Chr1: 11967862-11968251 | Arabidopsis thaliana |
AT1G33050:three_prime_UTR:2 | 13 | Chr1: 11968348-11968360 | Arabidopsis thaliana |
AT1G33055:three_prime_UTR:1 | 1028 | Chr1: 11971308-11972335 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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