External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G32370:CDS:1 | 141 | Chr1: 11677005-11677145 | Arabidopsis thaliana |
AT1G32370:CDS:2 | 66 | Chr1: 11677439-11677504 | Arabidopsis thaliana |
AT1G32370:CDS:3 | 65 | Chr1: 11677587-11677651 | Arabidopsis thaliana |
AT1G32370:CDS:4 | 91 | Chr1: 11677833-11677923 | Arabidopsis thaliana |
AT1G32370:CDS:8 | 15 | Chr1: 11678058-11678072 | Arabidopsis thaliana |
AT1G32370:CDS:1.1 | 141 | Chr1: 11677005-11677145 | Arabidopsis thaliana |
AT1G32370:CDS:2.1 | 66 | Chr1: 11677439-11677504 | Arabidopsis thaliana |
AT1G32370:CDS:3.1 | 65 | Chr1: 11677587-11677651 | Arabidopsis thaliana |
AT1G32370:CDS:6 | 97 | Chr1: 11677833-11677929 | Arabidopsis thaliana |
AT1G32370:CDS:1.2 | 141 | Chr1: 11677005-11677145 | Arabidopsis thaliana |
AT1G32370:CDS:2.2 | 66 | Chr1: 11677439-11677504 | Arabidopsis thaliana |
AT1G32370:CDS:3.2 | 65 | Chr1: 11677587-11677651 | Arabidopsis thaliana |
AT1G32370:CDS:4.1 | 91 | Chr1: 11677833-11677923 | Arabidopsis thaliana |
AT1G32370:CDS:7 | 9 | Chr1: 11678024-11678032 | Arabidopsis thaliana |
AT1G32370:CDS:1.3 | 141 | Chr1: 11677005-11677145 | Arabidopsis thaliana |
AT1G32370:CDS:2.3 | 66 | Chr1: 11677439-11677504 | Arabidopsis thaliana |
AT1G32370:CDS:3.3 | 65 | Chr1: 11677587-11677651 | Arabidopsis thaliana |
AT1G32370:CDS:5 | 93 | Chr1: 11677833-11677925 | Arabidopsis thaliana |
AT1G32370:CDS:9 | 31 | Chr1: 11678058-11678088 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G32370:exon:10 | 635 | Chr1: 11678058-11678692 | Arabidopsis thaliana |
AT1G32370:exon:1 | 221 | Chr1: 11676925-11677145 | Arabidopsis thaliana |
AT1G32370:exon:7 | 860 | Chr1: 11677833-11678692 | Arabidopsis thaliana |
AT1G32370:exon:5 | 91 | Chr1: 11677833-11677923 | Arabidopsis thaliana |
AT1G32370:exon:8 | 594 | Chr1: 11678024-11678617 | Arabidopsis thaliana |
AT1G32370:exon:2 | 201 | Chr1: 11676945-11677145 | Arabidopsis thaliana |
AT1G32370:exon:3 | 66 | Chr1: 11677439-11677504 | Arabidopsis thaliana |
AT1G32370:exon:4 | 65 | Chr1: 11677587-11677651 | Arabidopsis thaliana |
AT1G32370:exon:6 | 93 | Chr1: 11677833-11677925 | Arabidopsis thaliana |
AT1G32370:exon:9 | 560 | Chr1: 11678058-11678617 | Arabidopsis thaliana |
AT1G06543:exon:1 | 251 | Chr1: 11678679-11678929 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G32370:five_prime_UTR:1 | 80 | Chr1: 11676925-11677004 | Arabidopsis thaliana |
AT1G32370:five_prime_UTR:2 | 60 | Chr1: 11676945-11677004 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G06543 | AT1G06543 | 251 | Chr1: 11678679-11678929 | A. thaliana | None;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G32370.3 | 1078 | Chr1: 11676925-11678692 |
AT1G32370.1 | 1212 | Chr1: 11676925-11678692 |
AT1G32370.4 | 1017 | Chr1: 11676945-11678617 |
AT1G32370.2 | 985 | Chr1: 11676945-11678617 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G32370:three_prime_UTR:3 | 620 | Chr1: 11678073-11678692 | Arabidopsis thaliana |
AT1G32370:three_prime_UTR:1 | 763 | Chr1: 11677930-11678692 | Arabidopsis thaliana |
AT1G32370:three_prime_UTR:2 | 585 | Chr1: 11678033-11678617 | Arabidopsis thaliana |
AT1G32370:three_prime_UTR:4 | 529 | Chr1: 11678089-11678617 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
TOM2B_ARATH TOM2B_ARATH-2 TOM2B_ARATH-3 TOM2B_ARATH-4 | function | Necessary for the efficient intracellular multiplication of tobamoviruses. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
viral replication complex formation and maintenance | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...