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Gene : DRT111 A. thaliana

DB identifier  ? AT1G30480 Secondary Identifier  ? locus:2028130
Name  ? DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 Brief Description  D111/G-patch domain-containing protein
TAIR Computational Description  D111/G-patch domain-containing protein;(source:Araport11)
TAIR Curator Summary  recombination and DNA-damage resistance protein (DRT111). Part of SWAP1-SFPS-RRC1 splicing factor complex which modulates pre-mRNA. splicing to promote photomorphogenesis
TAIR Short Description  D111/G-patch domain-containing protein
TAIR Aliases  DRT111, RSN2, SFPS

1 Gene Rifs

1 Organism

16 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2704  
Location: Chr1:10790022-10792725

Gene models - DRT111 AT1G30480

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
DR111_ARATH function As a member of the SWAP1-SFPS-RRC1 splicing factor complex, modulates photomorphogenesis by regulating the gene expression and pre-messenger RNA (mRNA) alternative splicing of a large number of genes, including those involved in plant responses to light signaling, probably by helping in the 3' splice site determination (PubMed:25267732, PubMed:28760995, PubMed:32123040, PubMed:36282917). Associates with and regulates EARLY FLOWERING 3 (ELF3) mRNA processing, a key component of the circadian clock also involved in photomorphogenesis (PubMed:28760995). Required for light-regulated (red, far-red and blue lights) photomorphogenesis in a PHYB- and PHYTOCHROME INTERACTING FACTORS- (PIFs) dependent manner (PubMed:28760995). Promotes flowering under both short (SD) and long days (LD) (PubMed:28760995). Controls abscisic acid (ABA) sensitivity during seed development, stomatal responsiveness and germination by monitoring ABI3 splicing, upstream of the splicing factor SUPPRESSOR OF ABI3-ABI5 (PubMed:32123040). Seems to be involved in the resistance to UV light and chemical DNA-damaging agents (PubMed:8479917).
DR111_ARATH subcellular location Observed in subnuclear light-induced structures called photobodies in response to light (PubMed:28760995). Colocalizes in nuclear speckles with U2 small nuclear ribonucleoprotein-associated factors including U2AF65B, U2A' and U2AF35A and with SF1 (PubMed:28760995, PubMed:32123040).
DR111_ARATH tissue specificity Expressed ubiquitously with highest levels in dry seeds and in cells surrounding the base of trichomes and guard cells.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
chloroplast  ? ECO  
cytoplasm  ? ECO  
molecular function
RNA binding  ? ECO  
biological process
DNA repair  ? ECO  
mRNA cis splicing, via spliceosome  ? ECO  
regulation of RNA splicing  ? ECO  

Interactions

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets