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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 26, Exons: 16, Five Prime UTRs: 2, mRNAs: 2, Three Prime UTRs: 2, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30240:CDS:14 | 656 | Chr1: 10641241-10641896 | Arabidopsis thaliana |
AT1G30240:CDS:13 | 244 | Chr1: 10641985-10642228 | Arabidopsis thaliana |
AT1G30240:CDS:12 | 269 | Chr1: 10642405-10642673 | Arabidopsis thaliana |
AT1G30240:CDS:11 | 128 | Chr1: 10642748-10642875 | Arabidopsis thaliana |
AT1G30240:CDS:9 | 185 | Chr1: 10643155-10643339 | Arabidopsis thaliana |
AT1G30240:CDS:8 | 185 | Chr1: 10643631-10643815 | Arabidopsis thaliana |
AT1G30240:CDS:7 | 130 | Chr1: 10643898-10644027 | Arabidopsis thaliana |
AT1G30240:CDS:6 | 60 | Chr1: 10644110-10644169 | Arabidopsis thaliana |
AT1G30240:CDS:5 | 72 | Chr1: 10644354-10644425 | Arabidopsis thaliana |
AT1G30240:CDS:4 | 106 | Chr1: 10644759-10644864 | Arabidopsis thaliana |
AT1G30240:CDS:3 | 65 | Chr1: 10645202-10645266 | Arabidopsis thaliana |
AT1G30240:CDS:2 | 117 | Chr1: 10645356-10645472 | Arabidopsis thaliana |
AT1G30240:CDS:1 | 267 | Chr1: 10645572-10645838 | Arabidopsis thaliana |
AT1G30240:CDS:14.1 | 656 | Chr1: 10641241-10641896 | Arabidopsis thaliana |
AT1G30240:CDS:13.1 | 244 | Chr1: 10641985-10642228 | Arabidopsis thaliana |
AT1G30240:CDS:12.1 | 269 | Chr1: 10642405-10642673 | Arabidopsis thaliana |
AT1G30240:CDS:10 | 122 | Chr1: 10642754-10642875 | Arabidopsis thaliana |
AT1G30240:CDS:9.1 | 185 | Chr1: 10643155-10643339 | Arabidopsis thaliana |
AT1G30240:CDS:8.1 | 185 | Chr1: 10643631-10643815 | Arabidopsis thaliana |
AT1G30240:CDS:7.1 | 130 | Chr1: 10643898-10644027 | Arabidopsis thaliana |
AT1G30240:CDS:6.1 | 60 | Chr1: 10644110-10644169 | Arabidopsis thaliana |
AT1G30240:CDS:5.1 | 72 | Chr1: 10644354-10644425 | Arabidopsis thaliana |
AT1G30240:CDS:4.1 | 106 | Chr1: 10644759-10644864 | Arabidopsis thaliana |
AT1G30240:CDS:3.1 | 65 | Chr1: 10645202-10645266 | Arabidopsis thaliana |
AT1G30240:CDS:2.1 | 117 | Chr1: 10645356-10645472 | Arabidopsis thaliana |
AT1G30240:CDS:1.1 | 267 | Chr1: 10645572-10645838 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30240:exon:16 | 866 | Chr1: 10641031-10641896 | Arabidopsis thaliana |
AT1G30240:exon:12 | 128 | Chr1: 10642748-10642875 | Arabidopsis thaliana |
AT1G30240:exon:1 | 624 | Chr1: 10645572-10646195 | Arabidopsis thaliana |
AT1G30240:exon:15 | 798 | Chr1: 10641099-10641896 | Arabidopsis thaliana |
AT1G30240:exon:14 | 244 | Chr1: 10641985-10642228 | Arabidopsis thaliana |
AT1G30240:exon:13 | 269 | Chr1: 10642405-10642673 | Arabidopsis thaliana |
AT1G30240:exon:11 | 122 | Chr1: 10642754-10642875 | Arabidopsis thaliana |
AT1G30240:exon:10 | 185 | Chr1: 10643155-10643339 | Arabidopsis thaliana |
AT1G30240:exon:9 | 185 | Chr1: 10643631-10643815 | Arabidopsis thaliana |
AT1G30240:exon:8 | 130 | Chr1: 10643898-10644027 | Arabidopsis thaliana |
AT1G30240:exon:7 | 60 | Chr1: 10644110-10644169 | Arabidopsis thaliana |
AT1G30240:exon:6 | 72 | Chr1: 10644354-10644425 | Arabidopsis thaliana |
AT1G30240:exon:5 | 106 | Chr1: 10644759-10644864 | Arabidopsis thaliana |
AT1G30240:exon:4 | 65 | Chr1: 10645202-10645266 | Arabidopsis thaliana |
AT1G30240:exon:3 | 117 | Chr1: 10645356-10645472 | Arabidopsis thaliana |
AT1G30240:exon:2 | 364 | Chr1: 10645572-10645935 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30240:five_prime_UTR:1 | 357 | Chr1: 10645839-10646195 | Arabidopsis thaliana |
AT1G30240:five_prime_UTR:2 | 97 | Chr1: 10645839-10645935 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G30240.2 | 3051 | Chr1: 10641031-10646195 |
AT1G30240.1 | 2717 | Chr1: 10641099-10645935 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30240:three_prime_UTR:2 | 210 | Chr1: 10641031-10641240 | Arabidopsis thaliana |
AT1G30240:three_prime_UTR:1 | 142 | Chr1: 10641099-10641240 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE34430 | 57 | Chr1: 10646088-10646144 | Arabidopsis thaliana |
AT1TE34435 | 924 | Chr1: 10646145-10647068 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1TE34430:transposon_fragment:1 | 57 | Chr1: 10646088-10646144 | Arabidopsis thaliana |
AT1TE34435:transposon_fragment:1 | 924 | Chr1: 10646145-10647068 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A8MQA6_ARATH Q0WV78_ARATH | similarity | Belongs to the RIX1/PELP1 family. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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