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Gene : AT1G29850 A. thaliana

DB identifier  ? AT1G29850 Secondary Identifier  ? locus:2019377
Brief Description  double-stranded DNA-binding family protein
TAIR Computational Description  double-stranded DNA-binding family protein;(source:Araport11)
TAIR Curator Summary  Encodes a protein that by its interaction with HAM acetyltransferases plays an important role during DNA damage responses induced by UV-B radiation and participates in programmed cell death programs.
TAIR Short Description  double-stranded DNA-binding family protein
TAIR Aliases  AtPDCD5, PDCD5

2 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2623  
Location: Chr1:10447347-10449969

Gene models - AT1G29850 AT1G29850

? Gene models

Transcripts: 3  Exons: 21  Introns: 18 

Overlapping Features

? Genome features that overlap coordinates of this Gene

15 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
F4I354_ARATH A0A178W4B8_ARATH A0A178W2K7_ARATH similarity Belongs to the PDCD5 family.

3 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
nucleus  ? ECO  
molecular function
damaged DNA binding  ? ECO  
biological process
DNA repair  ? ECO  
programmed cell death  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets