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Gene : ML5 A. thaliana

DB identifier  ? AT1G29400 Secondary Identifier  ? locus:2013583
Name  ? MEI2-like protein 5 Brief Description  MEI2-like protein 5
TAIR Computational Description  MEI2-like protein 5;(source:Araport11)
TAIR Curator Summary  A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.
TAIR Short Description  MEI2-like protein 5
TAIR Aliases  AML5, ML5

0 Gene Rifs

1 Organism

17 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4633  
Location: Chr1:10289998-10294630 reverse strand

Gene models - ML5 AT1G29400

? Gene models

Transcripts: 3  Exons: 36  Introns: 33 

Overlapping Features

? Genome features that overlap coordinates of this Gene

19 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
AML5_ARATH developmental stage Expressed throughout the meristem during embryonic and vegetative development. Expressed in floral organogenic regions.
AML5_ARATH function Probable RNA-binding protein that plays a role in meiosis and vegetative growth.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
mRNA binding  ? ECO  
biological process
positive regulation of meiotic nuclear division  ? ECO  
meiotic cell cycle  ? ECO  
positive regulation of growth  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets