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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNAs: 2, CDSs: 21, Exons: 18, Five Prime UTRs: 4, Genes: 4, mRNAs: 7, Three Prime UTRs: 6
Antisense lncRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G06207.1 | 324 | Chr1: 10134774-10135097 |
AT1G06213.1 | 494 | Chr1: 10135454-10135947 |
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G29040:CDS:1 | 278 | Chr1: 10134120-10134397 | Arabidopsis thaliana |
AT1G29040:CDS:2 | 32 | Chr1: 10134505-10134536 | Arabidopsis thaliana |
AT1G29040:CDS:6 | 112 | Chr1: 10134686-10134797 | Arabidopsis thaliana |
AT1G29040:CDS:10 | 130 | Chr1: 10135051-10135180 | Arabidopsis thaliana |
AT1G29040:CDS:1.1 | 278 | Chr1: 10134120-10134397 | Arabidopsis thaliana |
AT1G29040:CDS:3 | 77 | Chr1: 10134505-10134581 | Arabidopsis thaliana |
AT1G29040:CDS:5 | 92 | Chr1: 10134686-10134777 | Arabidopsis thaliana |
AT1G29040:CDS:9 | 78 | Chr1: 10135051-10135128 | Arabidopsis thaliana |
AT1G29040:CDS:1.2 | 278 | Chr1: 10134120-10134397 | Arabidopsis thaliana |
AT1G29040:CDS:4 | 117 | Chr1: 10134505-10134621 | Arabidopsis thaliana |
AT1G29040:CDS:7 | 71 | Chr1: 10134727-10134797 | Arabidopsis thaliana |
AT1G29040:CDS:8 | 14 | Chr1: 10135051-10135064 | Arabidopsis thaliana |
AT1G29040:CDS:1.3 | 278 | Chr1: 10134120-10134397 | Arabidopsis thaliana |
AT1G29040:CDS:3.1 | 77 | Chr1: 10134505-10134581 | Arabidopsis thaliana |
AT1G29040:CDS:5.1 | 92 | Chr1: 10134686-10134777 | Arabidopsis thaliana |
AT1G29040:CDS:11 | 123 | Chr1: 10135058-10135180 | Arabidopsis thaliana |
AT1G29040:CDS:1.4 | 278 | Chr1: 10134120-10134397 | Arabidopsis thaliana |
AT1G29040:CDS:3.2 | 77 | Chr1: 10134505-10134581 | Arabidopsis thaliana |
AT1G29040:CDS:6.1 | 112 | Chr1: 10134686-10134797 | Arabidopsis thaliana |
AT1G29040:CDS:10.1 | 130 | Chr1: 10135051-10135180 | Arabidopsis thaliana |
AT1G29041:CDS:1 | 537 | Chr1: 10135451-10135987 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G29030:exon:1 | 103 | Chr1: 10133890-10133992 | Arabidopsis thaliana |
AT1G29040:exon:1 | 415 | Chr1: 10133983-10134397 | Arabidopsis thaliana |
AT1G29040:exon:4 | 32 | Chr1: 10134505-10134536 | Arabidopsis thaliana |
AT1G29040:exon:11 | 311 | Chr1: 10135051-10135361 | Arabidopsis thaliana |
AT1G29040:exon:2 | 342 | Chr1: 10134056-10134397 | Arabidopsis thaliana |
AT1G29040:exon:12 | 373 | Chr1: 10135051-10135423 | Arabidopsis thaliana |
AT1G29040:exon:6 | 117 | Chr1: 10134505-10134621 | Arabidopsis thaliana |
AT1G29040:exon:9 | 71 | Chr1: 10134727-10134797 | Arabidopsis thaliana |
AT1G29040:exon:10 | 306 | Chr1: 10135051-10135356 | Arabidopsis thaliana |
AT1G29040:exon:7 | 92 | Chr1: 10134686-10134777 | Arabidopsis thaliana |
AT1G29040:exon:14 | 299 | Chr1: 10135058-10135356 | Arabidopsis thaliana |
AT1G29040:exon:3 | 329 | Chr1: 10134069-10134397 | Arabidopsis thaliana |
AT1G29040:exon:5 | 77 | Chr1: 10134505-10134581 | Arabidopsis thaliana |
AT1G29040:exon:8 | 112 | Chr1: 10134686-10134797 | Arabidopsis thaliana |
AT1G29040:exon:13 | 1074 | Chr1: 10135051-10136124 | Arabidopsis thaliana |
AT1G06207:exon:1 | 324 | Chr1: 10134774-10135097 | Arabidopsis thaliana |
AT1G29041:exon:1 | 537 | Chr1: 10135451-10135987 | Arabidopsis thaliana |
AT1G06213:exon:1 | 494 | Chr1: 10135454-10135947 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G29030:five_prime_UTR:1 | 103 | Chr1: 10133890-10133992 | Arabidopsis thaliana |
AT1G29040:five_prime_UTR:1 | 137 | Chr1: 10133983-10134119 | Arabidopsis thaliana |
AT1G29040:five_prime_UTR:2 | 64 | Chr1: 10134056-10134119 | Arabidopsis thaliana |
AT1G29040:five_prime_UTR:3 | 51 | Chr1: 10134069-10134119 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G29030 | locus:2029994 | AT1G29030 | 4994 | Chr1: 10128999-10133992 | A. thaliana | Apoptosis inhibitory protein 5 (API5);(source:Araport11) | NULL | Apoptosis inhibitory protein 5 (API5) | ||
AT1G06207 | AT1G06207 | 324 | Chr1: 10134774-10135097 | A. thaliana | Natural antisense transcript overlaps with AT1G29040;(source:Araport11) | NULL | ||||
AT1G29041 | locus:5019474629 | AT1G29041 | 791 | Chr1: 10135451-10136241 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL | ||
AT1G06213 | AT1G06213 | 494 | Chr1: 10135454-10135947 | A. thaliana | Natural antisense transcript overlaps with AT1G29041;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G29030.2 | 1903 | Chr1: 10129027-10133992 |
AT1G29040.2 | 870 | Chr1: 10133983-10135361 |
AT1G29040.4 | 884 | Chr1: 10134056-10135423 |
AT1G29040.3 | 823 | Chr1: 10134069-10135356 |
AT1G29040.5 | 797 | Chr1: 10134069-10135356 |
AT1G29040.1 | 1592 | Chr1: 10134069-10136124 |
AT1G29041.1 | 594 | Chr1: 10135451-10136241 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G29040:three_prime_UTR:4 | 181 | Chr1: 10135181-10135361 | Arabidopsis thaliana |
AT1G29040:three_prime_UTR:2 | 295 | Chr1: 10135129-10135423 | Arabidopsis thaliana |
AT1G29040:three_prime_UTR:1 | 292 | Chr1: 10135065-10135356 | Arabidopsis thaliana |
AT1G29040:three_prime_UTR:3 | 176 | Chr1: 10135181-10135356 | Arabidopsis thaliana |
AT1G29040:three_prime_UTR:5 | 944 | Chr1: 10135181-10136124 | Arabidopsis thaliana |
AT1G29041:three_prime_UTR:1 | 1 | Chr1: 10135988-10135988 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
ribosome | ECO |
molecular function | |
GTP binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
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Data Source: ATTED-II |
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LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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