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Gene : AT1G28240 A. thaliana

DB identifier  ? AT1G28240 Secondary Identifier  ? locus:2032137
Brief Description  strawberry notch protein (DUF616)
TAIR Computational Description  strawberry notch protein (DUF616);(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Protein of unknown function (DUF616)
TAIR Aliases  MUCI70

1 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4022  
Location: Chr1:9868257-9872278 reverse strand

Gene models - AT1G28240 AT1G28240

? Gene models

Transcripts: 1  Exons: 9  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
MUC70_ARATH developmental stage Accumulates in developing seeds in siliques, mainly in the seed coat and, to a lesser extent, in the embryo.
MUC70_ARATH function Probable glycosyltransferase involved in pectin and/or xylans biosynthesis in cell walls (By similarity). Together with IRX14, required for xylan and pectin synthesis in seed coat epidermal (SCE) cells (PubMed:30228108). Collaboratively with GAUT11, essential for the accumulation of seed mucilage, a gelatinous wall rich in unbranched rhamnogalacturonan I (RG I), and for shaping the surface morphology of seeds (PubMed:30228108).
MUC70_ARATH pathway Glycan metabolism; pectin biosynthesis.
MUC70_ARATH similarity Belongs to the glycosyltransferase 8 family.
MUC70_ARATH tissue specificity Expressed in siliques and seeds.

1 Proteins

Function

Gene Ontology

cellular component
Golgi apparatus  ? ECO  
Golgi membrane  ? ECO  
molecular function
glycosyltransferase activity  ? ECO  
biological process
mucilage pectin biosynthetic process  ? ECO  
rhamnogalacturonan I biosynthetic process  ? ECO  
xylan metabolic process  ? ECO  
mucilage extrusion from seed coat  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets