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Gene : AT1G28160 A. thaliana

DB identifier  ? AT1G28160 Secondary Identifier  ? locus:2010529
Brief Description  Integrase-type DNA-binding superfamily protein
TAIR Computational Description  Integrase-type DNA-binding superfamily protein;(source:Araport11)
TAIR Curator Summary  encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
TAIR Short Description  Integrase-type DNA-binding superfamily protein

0 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 809  
Location: Chr1:9839316-9840124

Gene models - AT1G28160 AT1G28160

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDS: 1, Exon: 1, Five Prime UTR: 1, mRNA: 1

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ERF87_ARATH function Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
ERF87_ARATH similarity Belongs to the AP2/ERF transcription factor family. ERF subfamily.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
transcription cis-regulatory region binding  ? ECO  
biological process
ethylene-activated signaling pathway  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets