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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G27430:CDS:12 | 260 | Chr1: 9521045-9521304 | Arabidopsis thaliana |
AT1G27430:CDS:11 | 146 | Chr1: 9521389-9521534 | Arabidopsis thaliana |
AT1G27430:CDS:9 | 46 | Chr1: 9521656-9521701 | Arabidopsis thaliana |
AT1G27430:CDS:7 | 2157 | Chr1: 9521827-9523983 | Arabidopsis thaliana |
AT1G27430:CDS:6 | 711 | Chr1: 9524131-9524841 | Arabidopsis thaliana |
AT1G27430:CDS:5 | 99 | Chr1: 9524988-9525086 | Arabidopsis thaliana |
AT1G27430:CDS:4 | 91 | Chr1: 9525185-9525275 | Arabidopsis thaliana |
AT1G27430:CDS:3 | 831 | Chr1: 9525390-9526220 | Arabidopsis thaliana |
AT1G27430:CDS:2 | 71 | Chr1: 9526390-9526460 | Arabidopsis thaliana |
AT1G27430:CDS:1 | 67 | Chr1: 9526862-9526928 | Arabidopsis thaliana |
AT1G27430:CDS:8 | 11 | Chr1: 9521718-9521728 | Arabidopsis thaliana |
AT1G27430:CDS:7.1 | 2157 | Chr1: 9521827-9523983 | Arabidopsis thaliana |
AT1G27430:CDS:6.1 | 711 | Chr1: 9524131-9524841 | Arabidopsis thaliana |
AT1G27430:CDS:5.1 | 99 | Chr1: 9524988-9525086 | Arabidopsis thaliana |
AT1G27430:CDS:4.1 | 91 | Chr1: 9525185-9525275 | Arabidopsis thaliana |
AT1G27430:CDS:3.1 | 831 | Chr1: 9525390-9526220 | Arabidopsis thaliana |
AT1G27430:CDS:2.1 | 71 | Chr1: 9526390-9526460 | Arabidopsis thaliana |
AT1G27430:CDS:1.1 | 67 | Chr1: 9526862-9526928 | Arabidopsis thaliana |
AT1G27430:CDS:10 | 22 | Chr1: 9521433-9521454 | Arabidopsis thaliana |
AT1G27430:CDS:9.1 | 46 | Chr1: 9521656-9521701 | Arabidopsis thaliana |
AT1G27430:CDS:7.2 | 2157 | Chr1: 9521827-9523983 | Arabidopsis thaliana |
AT1G27430:CDS:6.2 | 711 | Chr1: 9524131-9524841 | Arabidopsis thaliana |
AT1G27430:CDS:5.2 | 99 | Chr1: 9524988-9525086 | Arabidopsis thaliana |
AT1G27430:CDS:4.2 | 91 | Chr1: 9525185-9525275 | Arabidopsis thaliana |
AT1G27430:CDS:3.2 | 831 | Chr1: 9525390-9526220 | Arabidopsis thaliana |
AT1G27430:CDS:2.2 | 71 | Chr1: 9526390-9526460 | Arabidopsis thaliana |
AT1G27430:CDS:1.2 | 67 | Chr1: 9526862-9526928 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G27430:exon:14 | 480 | Chr1: 9520825-9521304 | Arabidopsis thaliana |
AT1G27430:exon:11 | 146 | Chr1: 9521389-9521534 | Arabidopsis thaliana |
AT1G27430:exon:9 | 73 | Chr1: 9521656-9521728 | Arabidopsis thaliana |
AT1G27430:exon:1 | 419 | Chr1: 9526862-9527280 | Arabidopsis thaliana |
AT1G27430:exon:13 | 464 | Chr1: 9520841-9521304 | Arabidopsis thaliana |
AT1G27430:exon:12 | 66 | Chr1: 9521389-9521454 | Arabidopsis thaliana |
AT1G27430:exon:10 | 46 | Chr1: 9521656-9521701 | Arabidopsis thaliana |
AT1G27430:exon:8 | 2157 | Chr1: 9521827-9523983 | Arabidopsis thaliana |
AT1G27430:exon:7 | 711 | Chr1: 9524131-9524841 | Arabidopsis thaliana |
AT1G27430:exon:6 | 99 | Chr1: 9524988-9525086 | Arabidopsis thaliana |
AT1G27430:exon:5 | 91 | Chr1: 9525185-9525275 | Arabidopsis thaliana |
AT1G27430:exon:4 | 831 | Chr1: 9525390-9526220 | Arabidopsis thaliana |
AT1G27430:exon:3 | 71 | Chr1: 9526390-9526460 | Arabidopsis thaliana |
AT1G27430:exon:2 | 295 | Chr1: 9526862-9527156 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G27430:five_prime_UTR:1 | 352 | Chr1: 9526929-9527280 | Arabidopsis thaliana |
AT1G27430:five_prime_UTR:2 | 228 | Chr1: 9526929-9527156 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G27430.1 | 5051 | Chr1: 9520825-9527280 |
AT1G27430.2 | 5078 | Chr1: 9520825-9527280 |
AT1G27430.3 | 4831 | Chr1: 9520841-9527156 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G27430:three_prime_UTR:6 | 220 | Chr1: 9520825-9521044 | Arabidopsis thaliana |
AT1G27430:three_prime_UTR:5 | 480 | Chr1: 9520825-9521304 | Arabidopsis thaliana |
AT1G27430:three_prime_UTR:2 | 146 | Chr1: 9521389-9521534 | Arabidopsis thaliana |
AT1G27430:three_prime_UTR:1 | 62 | Chr1: 9521656-9521717 | Arabidopsis thaliana |
AT1G27430:three_prime_UTR:4 | 464 | Chr1: 9520841-9521304 | Arabidopsis thaliana |
AT1G27430:three_prime_UTR:3 | 44 | Chr1: 9521389-9521432 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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